Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PDS5AQ29RF7 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 LIN28AP1-201ENST00000429574 405 ntBASIC23.23■■□□□ 1.31
PDS5AQ29RF7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 NME3-204ENST00000563498 920 ntTSL 2 BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 AL049597.2-201ENST00000565575 961 ntBASIC23.23■■□□□ 1.31
PDS5AQ29RF7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC23.23■■□□□ 1.31
PDS5AQ29RF7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC23.22■■□□□ 1.31
PDS5AQ29RF7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDS5AQ29RF7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDS5AQ29RF7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
PDS5AQ29RF7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
PDS5AQ29RF7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDS5AQ29RF7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDS5AQ29RF7 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC23.22■■□□□ 1.31
PDS5AQ29RF7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
PDS5AQ29RF7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDS5AQ29RF7 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDS5AQ29RF7 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PDS5AQ29RF7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC23.22■■□□□ 1.31
PDS5AQ29RF7 AC104076.2-201ENST00000448912 469 ntBASIC23.22■■□□□ 1.31
PDS5AQ29RF7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDS5AQ29RF7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PDS5AQ29RF7 AL590326.2-201ENST00000625139 305 ntBASIC23.22■■□□□ 1.31
PDS5AQ29RF7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC23.22■■□□□ 1.31
PDS5AQ29RF7 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PDS5AQ29RF7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PDS5AQ29RF7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDS5AQ29RF7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.21■■□□□ 1.31
PDS5AQ29RF7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.21■■□□□ 1.31
PDS5AQ29RF7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDS5AQ29RF7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDS5AQ29RF7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PDS5AQ29RF7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC23.21■■□□□ 1.31
PDS5AQ29RF7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC23.21■■□□□ 1.31
PDS5AQ29RF7 TSPY23P-201ENST00000440136 739 ntBASIC23.21■■□□□ 1.31
PDS5AQ29RF7 BX664615.1-201ENST00000443558 458 ntBASIC23.21■■□□□ 1.31
PDS5AQ29RF7 ATP5G1P1-201ENST00000448724 379 ntBASIC23.21■■□□□ 1.31
PDS5AQ29RF7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
PDS5AQ29RF7 DUX4L26-201ENST00000489078 1255 ntBASIC23.21■■□□□ 1.31
PDS5AQ29RF7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.21■■□□□ 1.31
PDS5AQ29RF7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.21■■□□□ 1.31
PDS5AQ29RF7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDS5AQ29RF7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDS5AQ29RF7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PDS5AQ29RF7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
PDS5AQ29RF7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
PDS5AQ29RF7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDS5AQ29RF7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
PDS5AQ29RF7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDS5AQ29RF7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC23.2■■□□□ 1.3
PDS5AQ29RF7 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC23.2■■□□□ 1.3
PDS5AQ29RF7 AL512604.3-201ENST00000569583 964 ntBASIC23.2■■□□□ 1.3
PDS5AQ29RF7 AL445228.2-201ENST00000605589 952 ntBASIC23.2■■□□□ 1.3
PDS5AQ29RF7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC23.2■■□□□ 1.3
PDS5AQ29RF7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDS5AQ29RF7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.2■■□□□ 1.3
PDS5AQ29RF7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDS5AQ29RF7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC23.2■■□□□ 1.3
PDS5AQ29RF7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PDS5AQ29RF7 TREX1-205ENST00000625293 1783 ntBASIC23.2■■□□□ 1.3
PDS5AQ29RF7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDS5AQ29RF7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PDS5AQ29RF7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 SDHAP1-207ENST00000440850 2000 ntBASIC23.19■■□□□ 1.3
PDS5AQ29RF7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 AC112907.3-201ENST00000577781 2400 ntBASIC23.19■■□□□ 1.3
PDS5AQ29RF7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
PDS5AQ29RF7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms