Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17■□□□□ 0.31
LSM6P62312 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
LSM6P62312 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17■□□□□ 0.31
LSM6P62312 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LSM6P62312 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17■□□□□ 0.31
LSM6P62312 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.99■□□□□ 0.31
LSM6P62312 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM6P62312 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM6P62312 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM6P62312 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
LSM6P62312 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
LSM6P62312 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LSM6P62312 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM6P62312 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LSM6P62312 ESRRAP1-201ENST00000400596 1257 ntBASIC16.99■□□□□ 0.31
LSM6P62312 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.99■□□□□ 0.31
LSM6P62312 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.99■□□□□ 0.31
LSM6P62312 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC16.99■□□□□ 0.31
LSM6P62312 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.99■□□□□ 0.31
LSM6P62312 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
LSM6P62312 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM6P62312 LINC01465-201ENST00000408887 1940 ntBASIC16.99■□□□□ 0.31
LSM6P62312 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LSM6P62312 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.99■□□□□ 0.31
LSM6P62312 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LSM6P62312 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM6P62312 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LSM6P62312 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LSM6P62312 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.99■□□□□ 0.31
LSM6P62312 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.98■□□□□ 0.31
LSM6P62312 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LSM6P62312 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
LSM6P62312 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.98■□□□□ 0.31
LSM6P62312 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.98■□□□□ 0.31
LSM6P62312 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.98■□□□□ 0.31
LSM6P62312 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
LSM6P62312 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.98■□□□□ 0.31
LSM6P62312 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LSM6P62312 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.98■□□□□ 0.31
LSM6P62312 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.97■□□□□ 0.31
LSM6P62312 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.97■□□□□ 0.31
LSM6P62312 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.97■□□□□ 0.31
LSM6P62312 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM6P62312 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LSM6P62312 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM6P62312 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LSM6P62312 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
LSM6P62312 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.97■□□□□ 0.31
LSM6P62312 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM6P62312 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM6P62312 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.97■□□□□ 0.31
LSM6P62312 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.97■□□□□ 0.31
LSM6P62312 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LSM6P62312 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM6P62312 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM6P62312 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM6P62312 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.97■□□□□ 0.31
LSM6P62312 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.97■□□□□ 0.31
LSM6P62312 C1QL1P1-201ENST00000568105 661 ntBASIC16.97■□□□□ 0.31
LSM6P62312 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
LSM6P62312 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.97■□□□□ 0.31
LSM6P62312 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
LSM6P62312 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.97■□□□□ 0.31
LSM6P62312 SDHAP1-207ENST00000440850 2000 ntBASIC16.97■□□□□ 0.31
LSM6P62312 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
LSM6P62312 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.97■□□□□ 0.31
LSM6P62312 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM6P62312 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM6P62312 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
LSM6P62312 TEX21P-204ENST00000641479 1693 ntBASIC16.97■□□□□ 0.31
LSM6P62312 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
LSM6P62312 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms