Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H2P55055 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H2P55055 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H2P55055 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H2P55055 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NR1H2P55055 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H2P55055 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H2P55055 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H2P55055 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NR1H2P55055 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H2P55055 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NR1H2P55055 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.28■□□□□ 0.52
NR1H2P55055 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.28■□□□□ 0.52
NR1H2P55055 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.28■□□□□ 0.52
NR1H2P55055 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H2P55055 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.28■□□□□ 0.52
NR1H2P55055 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.28■□□□□ 0.52
NR1H2P55055 AC069236.1-201ENST00000604339 616 ntBASIC18.28■□□□□ 0.52
NR1H2P55055 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NR1H2P55055 AC133041.1-202ENST00000642053 222 ntBASIC18.28■□□□□ 0.52
NR1H2P55055 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H2P55055 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H2P55055 KRT16P2-201ENST00000414673 1423 ntBASIC18.28■□□□□ 0.52
NR1H2P55055 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H2P55055 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H2P55055 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.28■□□□□ 0.52
NR1H2P55055 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H2P55055 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H2P55055 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H2P55055 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
NR1H2P55055 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H2P55055 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
NR1H2P55055 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.28■□□□□ 0.52
NR1H2P55055 HCG11-201ENST00000411553 5696 ntBASIC18.27■□□□□ 0.52
NR1H2P55055 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR1H2P55055 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR1H2P55055 AL354751.1-201ENST00000412768 1863 ntBASIC18.27■□□□□ 0.52
NR1H2P55055 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR1H2P55055 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.27■□□□□ 0.52
NR1H2P55055 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR1H2P55055 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
NR1H2P55055 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NR1H2P55055 AC073210.2-201ENST00000430369 194 ntBASIC18.27■□□□□ 0.52
NR1H2P55055 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
NR1H2P55055 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.27■□□□□ 0.52
NR1H2P55055 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.27■□□□□ 0.52
NR1H2P55055 OR10C1-204ENST00000622521 1039 ntBASIC18.27■□□□□ 0.52
NR1H2P55055 TMEM191A-211ENST00000637163 1067 ntBASIC18.27■□□□□ 0.52
NR1H2P55055 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR1H2P55055 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR1H2P55055 BICD1-207ENST00000551848 1962 ntBASIC18.27■□□□□ 0.52
NR1H2P55055 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR1H2P55055 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR1H2P55055 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR1H2P55055 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR1H2P55055 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR1H2P55055 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
NR1H2P55055 AIRN-201ENST00000601203 4374 ntBASIC18.27■□□□□ 0.51
NR1H2P55055 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.27■□□□□ 0.51
NR1H2P55055 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.26■□□□□ 0.51
NR1H2P55055 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.26■□□□□ 0.51
NR1H2P55055 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NR1H2P55055 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
NR1H2P55055 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NR1H2P55055 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.26■□□□□ 0.51
NR1H2P55055 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NR1H2P55055 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NR1H2P55055 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.26■□□□□ 0.51
NR1H2P55055 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NR1H2P55055 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.26■□□□□ 0.51
NR1H2P55055 CYP2T1P-201ENST00000432607 1285 ntBASIC18.26■□□□□ 0.51
NR1H2P55055 AC069152.1-201ENST00000438030 544 ntBASIC18.26■□□□□ 0.51
NR1H2P55055 TSPY20P-201ENST00000450910 630 ntBASIC18.26■□□□□ 0.51
NR1H2P55055 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NR1H2P55055 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.26■□□□□ 0.51
NR1H2P55055 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
NR1H2P55055 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.26■□□□□ 0.51
NR1H2P55055 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NR1H2P55055 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.26■□□□□ 0.51
NR1H2P55055 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.26■□□□□ 0.51
NR1H2P55055 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NR1H2P55055 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
NR1H2P55055 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.26■□□□□ 0.51
NR1H2P55055 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.26■□□□□ 0.51
NR1H2P55055 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NR1H2P55055 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.26■□□□□ 0.51
NR1H2P55055 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NR1H2P55055 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NR1H2P55055 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR1H2P55055 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR1H2P55055 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.25■□□□□ 0.51
NR1H2P55055 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR1H2P55055 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR1H2P55055 AC068338.2-201ENST00000563278 1430 ntBASIC18.25■□□□□ 0.51
NR1H2P55055 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.25■□□□□ 0.51
NR1H2P55055 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NR1H2P55055 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NR1H2P55055 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.25■□□□□ 0.51
NR1H2P55055 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.25■□□□□ 0.51
NR1H2P55055 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms