Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.65■■□□□ 1.38
PDE1AP54750 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDE1AP54750 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PDE1AP54750 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PDE1AP54750 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PDE1AP54750 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDE1AP54750 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC23.65■■□□□ 1.38
PDE1AP54750 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
PDE1AP54750 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDE1AP54750 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC23.65■■□□□ 1.38
PDE1AP54750 C1QBPP2-201ENST00000528754 825 ntBASIC23.65■■□□□ 1.38
PDE1AP54750 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC23.65■■□□□ 1.38
PDE1AP54750 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PDE1AP54750 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC23.65■■□□□ 1.38
PDE1AP54750 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
PDE1AP54750 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC23.65■■□□□ 1.38
PDE1AP54750 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PDE1AP54750 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PDE1AP54750 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.64■■□□□ 1.38
PDE1AP54750 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC23.64■■□□□ 1.38
PDE1AP54750 AL161938.1-201ENST00000569833 2180 ntBASIC23.64■■□□□ 1.38
PDE1AP54750 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PDE1AP54750 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
PDE1AP54750 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
PDE1AP54750 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
PDE1AP54750 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PDE1AP54750 FAM201B-201ENST00000458407 597 ntBASIC23.64■■□□□ 1.37
PDE1AP54750 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
PDE1AP54750 RPPH1-201ENST00000516869 333 ntBASIC23.64■■□□□ 1.37
PDE1AP54750 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC23.64■■□□□ 1.37
PDE1AP54750 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.64■■□□□ 1.37
PDE1AP54750 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PDE1AP54750 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC23.64■■□□□ 1.37
PDE1AP54750 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDE1AP54750 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PDE1AP54750 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
PDE1AP54750 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDE1AP54750 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDE1AP54750 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDE1AP54750 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDE1AP54750 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDE1AP54750 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDE1AP54750 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDE1AP54750 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PDE1AP54750 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC23.63■■□□□ 1.37
PDE1AP54750 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
PDE1AP54750 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC23.63■■□□□ 1.37
PDE1AP54750 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
PDE1AP54750 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDE1AP54750 AL049812.1-201ENST00000432563 2267 ntBASIC23.63■■□□□ 1.37
PDE1AP54750 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PDE1AP54750 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PDE1AP54750 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.63■■□□□ 1.37
PDE1AP54750 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
PDE1AP54750 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PDE1AP54750 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.62■■□□□ 1.37
PDE1AP54750 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC23.62■■□□□ 1.37
PDE1AP54750 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC23.62■■□□□ 1.37
PDE1AP54750 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
PDE1AP54750 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDE1AP54750 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.62■■□□□ 1.37
PDE1AP54750 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC23.62■■□□□ 1.37
PDE1AP54750 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
PDE1AP54750 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDE1AP54750 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDE1AP54750 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.62■■□□□ 1.37
PDE1AP54750 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDE1AP54750 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDE1AP54750 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC23.61■■□□□ 1.37
PDE1AP54750 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
PDE1AP54750 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDE1AP54750 PRORSD1P-201ENST00000295112 541 ntBASIC23.61■■□□□ 1.37
PDE1AP54750 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC23.61■■□□□ 1.37
PDE1AP54750 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDE1AP54750 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PDE1AP54750 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PDE1AP54750 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.61■■□□□ 1.37
PDE1AP54750 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC23.61■■□□□ 1.37
PDE1AP54750 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.61■■□□□ 1.37
PDE1AP54750 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC23.61■■□□□ 1.37
PDE1AP54750 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDE1AP54750 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDE1AP54750 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PDE1AP54750 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC23.61■■□□□ 1.37
PDE1AP54750 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PDE1AP54750 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDE1AP54750 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC23.61■■□□□ 1.37
PDE1AP54750 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC23.61■■□□□ 1.37
PDE1AP54750 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PDE1AP54750 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE1AP54750 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE1AP54750 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE1AP54750 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
PDE1AP54750 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
PDE1AP54750 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
PDE1AP54750 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDE1AP54750 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC23.6■■□□□ 1.37
PDE1AP54750 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC23.6■■□□□ 1.37
PDE1AP54750 TK2-204ENST00000525974 1178 ntTSL 2 BASIC23.6■■□□□ 1.37
PDE1AP54750 AL160286.2-201ENST00000567150 934 ntBASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms