Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
CLTCL1P53675 AC112907.2-201ENST00000448639 330 ntBASIC27.77■■■□□ 2.04
CLTCL1P53675 CD81-212ENST00000526072 1172 ntTSL 5 BASIC27.77■■■□□ 2.04
CLTCL1P53675 NEK4P2-201ENST00000580004 1012 ntBASIC27.77■■■□□ 2.04
CLTCL1P53675 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CLTCL1P53675 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC27.77■■■□□ 2.04
CLTCL1P53675 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
CLTCL1P53675 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
CLTCL1P53675 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC27.76■■■□□ 2.04
CLTCL1P53675 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CLTCL1P53675 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CLTCL1P53675 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
CLTCL1P53675 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC27.76■■■□□ 2.03
CLTCL1P53675 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CLTCL1P53675 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
CLTCL1P53675 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CLTCL1P53675 PCED1CP-201ENST00000419887 785 ntBASIC27.76■■■□□ 2.03
CLTCL1P53675 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC27.76■■■□□ 2.03
CLTCL1P53675 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
CLTCL1P53675 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC27.76■■■□□ 2.03
CLTCL1P53675 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CLTCL1P53675 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC27.75■■■□□ 2.03
CLTCL1P53675 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC27.75■■■□□ 2.03
CLTCL1P53675 HOMER2P1-201ENST00000455653 964 ntBASIC27.75■■■□□ 2.03
CLTCL1P53675 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CLTCL1P53675 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC27.75■■■□□ 2.03
CLTCL1P53675 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC27.75■■■□□ 2.03
CLTCL1P53675 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CLTCL1P53675 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CLTCL1P53675 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC27.75■■■□□ 2.03
CLTCL1P53675 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CLTCL1P53675 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC27.75■■■□□ 2.03
CLTCL1P53675 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CLTCL1P53675 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
CLTCL1P53675 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CLTCL1P53675 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CLTCL1P53675 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC27.74■■■□□ 2.03
CLTCL1P53675 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC27.74■■■□□ 2.03
CLTCL1P53675 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC27.74■■■□□ 2.03
CLTCL1P53675 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CLTCL1P53675 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CLTCL1P53675 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CLTCL1P53675 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CLTCL1P53675 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CLTCL1P53675 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CLTCL1P53675 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC27.74■■■□□ 2.03
CLTCL1P53675 PHB2-202ENST00000440277 996 ntTSL 5 BASIC27.74■■■□□ 2.03
CLTCL1P53675 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC27.74■■■□□ 2.03
CLTCL1P53675 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC27.74■■■□□ 2.03
CLTCL1P53675 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC27.74■■■□□ 2.03
CLTCL1P53675 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC27.74■■■□□ 2.03
CLTCL1P53675 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC27.74■■■□□ 2.03
CLTCL1P53675 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC27.74■■■□□ 2.03
CLTCL1P53675 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC27.74■■■□□ 2.03
CLTCL1P53675 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CLTCL1P53675 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC27.74■■■□□ 2.03
CLTCL1P53675 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
CLTCL1P53675 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CLTCL1P53675 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CLTCL1P53675 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC27.73■■■□□ 2.03
CLTCL1P53675 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
CLTCL1P53675 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CLTCL1P53675 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CLTCL1P53675 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CLTCL1P53675 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC27.73■■■□□ 2.03
CLTCL1P53675 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
CLTCL1P53675 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC27.73■■■□□ 2.03
CLTCL1P53675 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC27.73■■■□□ 2.03
CLTCL1P53675 HYMAI.1-201ENST00000620949 238 ntBASIC27.73■■■□□ 2.03
CLTCL1P53675 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CLTCL1P53675 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CLTCL1P53675 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC27.72■■■□□ 2.03
CLTCL1P53675 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CLTCL1P53675 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CLTCL1P53675 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CLTCL1P53675 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC27.72■■■□□ 2.03
CLTCL1P53675 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC27.72■■■□□ 2.03
CLTCL1P53675 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CLTCL1P53675 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CLTCL1P53675 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CLTCL1P53675 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CLTCL1P53675 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
CLTCL1P53675 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CLTCL1P53675 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
CLTCL1P53675 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC27.72■■■□□ 2.03
CLTCL1P53675 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC27.72■■■□□ 2.03
CLTCL1P53675 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CLTCL1P53675 AP000523.1-201ENST00000398242 1049 ntBASIC27.71■■■□□ 2.03
CLTCL1P53675 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CLTCL1P53675 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
CLTCL1P53675 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC27.71■■■□□ 2.03
CLTCL1P53675 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC27.71■■■□□ 2.03
CLTCL1P53675 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC27.71■■■□□ 2.03
CLTCL1P53675 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC27.71■■■□□ 2.03
CLTCL1P53675 CR769767.2-201ENST00000622735 460 ntBASIC27.71■■■□□ 2.03
CLTCL1P53675 DFFB-212ENST00000625756 649 ntTSL 5 BASIC27.71■■■□□ 2.03
CLTCL1P53675 AC036111.1-201ENST00000533973 1582 ntBASIC27.71■■■□□ 2.03
CLTCL1P53675 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC27.71■■■□□ 2.03
CLTCL1P53675 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CLTCL1P53675 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms