Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC1A2P43004 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A2P43004 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A2P43004 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
SLC1A2P43004 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A2P43004 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A2P43004 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SLC1A2P43004 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A2P43004 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A2P43004 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A2P43004 AC093503.3-201ENST00000624917 2352 ntBASIC19.28■□□□□ 0.68
SLC1A2P43004 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A2P43004 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC1A2P43004 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC1A2P43004 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC1A2P43004 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SLC1A2P43004 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC1A2P43004 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
SLC1A2P43004 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC1A2P43004 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A2P43004 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A2P43004 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A2P43004 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A2P43004 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC1A2P43004 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SLC1A2P43004 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A2P43004 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A2P43004 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC1A2P43004 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC1A2P43004 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC1A2P43004 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC1A2P43004 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.27■□□□□ 0.68
SLC1A2P43004 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
SLC1A2P43004 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SLC1A2P43004 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A2P43004 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SLC1A2P43004 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A2P43004 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC1A2P43004 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
SLC1A2P43004 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
SLC1A2P43004 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SLC1A2P43004 RNF165-205ENST00000588679 2904 ntBASIC19.27■□□□□ 0.67
SLC1A2P43004 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC1A2P43004 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A2P43004 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A2P43004 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC1A2P43004 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A2P43004 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A2P43004 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SLC1A2P43004 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A2P43004 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SLC1A2P43004 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC1A2P43004 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A2P43004 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SLC1A2P43004 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SLC1A2P43004 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SLC1A2P43004 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A2P43004 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A2P43004 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC1A2P43004 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
SLC1A2P43004 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.26■□□□□ 0.67
SLC1A2P43004 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.26■□□□□ 0.67
SLC1A2P43004 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.26■□□□□ 0.67
SLC1A2P43004 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A2P43004 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A2P43004 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC1A2P43004 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC1A2P43004 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC1A2P43004 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A2P43004 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC1A2P43004 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC1A2P43004 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A2P43004 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC1A2P43004 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC1A2P43004 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A2P43004 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC1A2P43004 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A2P43004 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SLC1A2P43004 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC1A2P43004 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
SLC1A2P43004 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SLC1A2P43004 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC1A2P43004 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC1A2P43004 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC1A2P43004 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC1A2P43004 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A2P43004 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC1A2P43004 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A2P43004 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
SLC1A2P43004 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A2P43004 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SLC1A2P43004 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A2P43004 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
SLC1A2P43004 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC1A2P43004 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC1A2P43004 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SLC1A2P43004 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC1A2P43004 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SLC1A2P43004 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC1A2P43004 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms