Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AC011298.2-201ENST00000617989 482 ntBASIC17.57■□□□□ 0.4
GDF1P27539 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GDF1P27539 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GDF1P27539 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GDF1P27539 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.57■□□□□ 0.4
GDF1P27539 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GDF1P27539 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GDF1P27539 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GDF1P27539 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GDF1P27539 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GDF1P27539 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
GDF1P27539 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.56■□□□□ 0.4
GDF1P27539 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GDF1P27539 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GDF1P27539 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.56■□□□□ 0.4
GDF1P27539 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.56■□□□□ 0.4
GDF1P27539 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GDF1P27539 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.56■□□□□ 0.4
GDF1P27539 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
GDF1P27539 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
GDF1P27539 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GDF1P27539 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.56■□□□□ 0.4
GDF1P27539 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.56■□□□□ 0.4
GDF1P27539 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.56■□□□□ 0.4
GDF1P27539 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.56■□□□□ 0.4
GDF1P27539 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GDF1P27539 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.56■□□□□ 0.4
GDF1P27539 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.56■□□□□ 0.4
GDF1P27539 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GDF1P27539 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.56■□□□□ 0.4
GDF1P27539 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GDF1P27539 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GDF1P27539 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GDF1P27539 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GDF1P27539 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.56■□□□□ 0.4
GDF1P27539 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GDF1P27539 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF1P27539 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.55■□□□□ 0.4
GDF1P27539 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.55■□□□□ 0.4
GDF1P27539 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF1P27539 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.55■□□□□ 0.4
GDF1P27539 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GDF1P27539 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF1P27539 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.55■□□□□ 0.4
GDF1P27539 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GDF1P27539 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.55■□□□□ 0.4
GDF1P27539 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.55■□□□□ 0.4
GDF1P27539 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.55■□□□□ 0.4
GDF1P27539 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.55■□□□□ 0.4
GDF1P27539 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.55■□□□□ 0.4
GDF1P27539 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GDF1P27539 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
GDF1P27539 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GDF1P27539 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.54■□□□□ 0.4
GDF1P27539 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GDF1P27539 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GDF1P27539 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.54■□□□□ 0.4
GDF1P27539 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GDF1P27539 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GDF1P27539 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GDF1P27539 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.54■□□□□ 0.4
GDF1P27539 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
GDF1P27539 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.54■□□□□ 0.4
GDF1P27539 CRYGFP-201ENST00000418459 633 ntBASIC17.54■□□□□ 0.4
GDF1P27539 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.54■□□□□ 0.4
GDF1P27539 AC097488.1-201ENST00000507834 756 ntBASIC17.54■□□□□ 0.4
GDF1P27539 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GDF1P27539 FITM1-202ENST00000559294 800 ntBASIC17.54■□□□□ 0.4
GDF1P27539 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.54■□□□□ 0.4
GDF1P27539 SLC25A1P4-201ENST00000567977 778 ntBASIC17.54■□□□□ 0.4
GDF1P27539 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.54■□□□□ 0.4
GDF1P27539 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.54■□□□□ 0.4
GDF1P27539 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GDF1P27539 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
GDF1P27539 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.54■□□□□ 0.4
GDF1P27539 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GDF1P27539 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
GDF1P27539 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
GDF1P27539 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GDF1P27539 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
GDF1P27539 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
GDF1P27539 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
GDF1P27539 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.53■□□□□ 0.4
GDF1P27539 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.53■□□□□ 0.4
GDF1P27539 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
GDF1P27539 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GDF1P27539 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.53■□□□□ 0.4
GDF1P27539 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
GDF1P27539 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
GDF1P27539 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GDF1P27539 FAM207BP-201ENST00000447172 505 ntBASIC17.53■□□□□ 0.4
GDF1P27539 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.53■□□□□ 0.4
GDF1P27539 Z85996.1-201ENST00000494644 937 ntBASIC17.53■□□□□ 0.4
GDF1P27539 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
GDF1P27539 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.53■□□□□ 0.4
GDF1P27539 NAPSB-206ENST00000562112 1266 ntBASIC17.53■□□□□ 0.4
GDF1P27539 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.53■□□□□ 0.4
GDF1P27539 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
GDF1P27539 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.53■□□□□ 0.4
GDF1P27539 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms