Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
VARSP26640 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.98■□□□□ 0.63
VARSP26640 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.98■□□□□ 0.63
VARSP26640 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.98■□□□□ 0.63
VARSP26640 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.98■□□□□ 0.63
VARSP26640 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.98■□□□□ 0.63
VARSP26640 FAM197Y4-202ENST00000622692 608 ntBASIC18.98■□□□□ 0.63
VARSP26640 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.98■□□□□ 0.63
VARSP26640 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.98■□□□□ 0.63
VARSP26640 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
VARSP26640 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
VARSP26640 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
VARSP26640 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.98■□□□□ 0.63
VARSP26640 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
VARSP26640 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARSP26640 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.97■□□□□ 0.63
VARSP26640 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARSP26640 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
VARSP26640 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.97■□□□□ 0.63
VARSP26640 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARSP26640 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARSP26640 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
VARSP26640 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
VARSP26640 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.97■□□□□ 0.63
VARSP26640 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARSP26640 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARSP26640 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARSP26640 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.97■□□□□ 0.63
VARSP26640 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.97■□□□□ 0.63
VARSP26640 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.97■□□□□ 0.63
VARSP26640 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
VARSP26640 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.97■□□□□ 0.63
VARSP26640 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.97■□□□□ 0.63
VARSP26640 AL359736.2-201ENST00000621992 437 ntBASIC18.97■□□□□ 0.63
VARSP26640 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.97■□□□□ 0.63
VARSP26640 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARSP26640 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
VARSP26640 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
VARSP26640 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
VARSP26640 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
VARSP26640 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VARSP26640 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VARSP26640 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.96■□□□□ 0.63
VARSP26640 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.96■□□□□ 0.63
VARSP26640 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VARSP26640 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VARSP26640 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.96■□□□□ 0.63
VARSP26640 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VARSP26640 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.96■□□□□ 0.63
VARSP26640 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
VARSP26640 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.96■□□□□ 0.63
VARSP26640 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.96■□□□□ 0.63
VARSP26640 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
VARSP26640 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VARSP26640 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VARSP26640 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
VARSP26640 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
VARSP26640 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.96■□□□□ 0.63
VARSP26640 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
VARSP26640 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.96■□□□□ 0.63
VARSP26640 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.96■□□□□ 0.62
VARSP26640 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VARSP26640 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
VARSP26640 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VARSP26640 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.95■□□□□ 0.62
VARSP26640 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VARSP26640 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.95■□□□□ 0.62
VARSP26640 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VARSP26640 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.95■□□□□ 0.62
VARSP26640 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.95■□□□□ 0.62
VARSP26640 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.95■□□□□ 0.62
VARSP26640 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VARSP26640 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.95■□□□□ 0.62
VARSP26640 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.95■□□□□ 0.62
VARSP26640 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.95■□□□□ 0.62
VARSP26640 AC008403.3-201ENST00000598924 454 ntBASIC18.95■□□□□ 0.62
VARSP26640 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.95■□□□□ 0.62
VARSP26640 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VARSP26640 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VARSP26640 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.95■□□□□ 0.62
VARSP26640 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
VARSP26640 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.95■□□□□ 0.62
VARSP26640 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VARSP26640 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
VARSP26640 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.94■□□□□ 0.62
VARSP26640 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.94■□□□□ 0.62
VARSP26640 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.94■□□□□ 0.62
VARSP26640 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms