Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.35■□□□□ 0.21
COL8A2P25067 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
COL8A2P25067 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
COL8A2P25067 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
COL8A2P25067 RCC2P6-201ENST00000526625 1557 ntBASIC16.34■□□□□ 0.21
COL8A2P25067 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
COL8A2P25067 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL8A2P25067 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
COL8A2P25067 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.34■□□□□ 0.21
COL8A2P25067 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
COL8A2P25067 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
COL8A2P25067 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
COL8A2P25067 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
COL8A2P25067 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL8A2P25067 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.34■□□□□ 0.21
COL8A2P25067 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL8A2P25067 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL8A2P25067 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL8A2P25067 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.34■□□□□ 0.21
COL8A2P25067 CRYGFP-201ENST00000418459 633 ntBASIC16.34■□□□□ 0.21
COL8A2P25067 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.34■□□□□ 0.21
COL8A2P25067 NAPSB-206ENST00000562112 1266 ntBASIC16.34■□□□□ 0.21
COL8A2P25067 AL160286.2-201ENST00000567150 934 ntBASIC16.34■□□□□ 0.21
COL8A2P25067 AC011298.2-201ENST00000617989 482 ntBASIC16.34■□□□□ 0.21
COL8A2P25067 AC010947.1-201ENST00000623454 693 ntBASIC16.34■□□□□ 0.21
COL8A2P25067 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.34■□□□□ 0.21
COL8A2P25067 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.34■□□□□ 0.21
COL8A2P25067 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL8A2P25067 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL8A2P25067 LINC01568-207ENST00000641790 1380 ntBASIC16.34■□□□□ 0.21
COL8A2P25067 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
COL8A2P25067 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.34■□□□□ 0.21
COL8A2P25067 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL8A2P25067 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL8A2P25067 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
COL8A2P25067 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.34■□□□□ 0.21
COL8A2P25067 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
COL8A2P25067 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.21
COL8A2P25067 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
COL8A2P25067 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
COL8A2P25067 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL8A2P25067 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
COL8A2P25067 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL8A2P25067 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
COL8A2P25067 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.33■□□□□ 0.21
COL8A2P25067 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL8A2P25067 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL8A2P25067 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL8A2P25067 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL8A2P25067 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL8A2P25067 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
COL8A2P25067 AC004951.3-201ENST00000418645 1148 ntBASIC16.33■□□□□ 0.2
COL8A2P25067 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL8A2P25067 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.33■□□□□ 0.2
COL8A2P25067 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL8A2P25067 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.33■□□□□ 0.2
COL8A2P25067 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.33■□□□□ 0.2
COL8A2P25067 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.33■□□□□ 0.2
COL8A2P25067 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.33■□□□□ 0.2
COL8A2P25067 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.33■□□□□ 0.2
COL8A2P25067 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.33■□□□□ 0.2
COL8A2P25067 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.33■□□□□ 0.2
COL8A2P25067 SLC25A1P4-201ENST00000567977 778 ntBASIC16.33■□□□□ 0.2
COL8A2P25067 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
COL8A2P25067 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.33■□□□□ 0.2
COL8A2P25067 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
COL8A2P25067 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
COL8A2P25067 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.33■□□□□ 0.2
COL8A2P25067 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.33■□□□□ 0.2
COL8A2P25067 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.33■□□□□ 0.2
COL8A2P25067 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL8A2P25067 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL8A2P25067 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL8A2P25067 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
COL8A2P25067 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.33■□□□□ 0.2
COL8A2P25067 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
COL8A2P25067 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
COL8A2P25067 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.32■□□□□ 0.2
COL8A2P25067 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
COL8A2P25067 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL8A2P25067 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
COL8A2P25067 AC145285.6-201ENST00000604632 637 ntBASIC16.32■□□□□ 0.2
COL8A2P25067 AP000692.2-201ENST00000608391 879 ntBASIC16.32■□□□□ 0.2
COL8A2P25067 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms