Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NR4A1P22736 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.92■□□□□ 0.46
NR4A1P22736 AL050303.2-201ENST00000619798 666 ntBASIC17.92■□□□□ 0.46
NR4A1P22736 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.92■□□□□ 0.46
NR4A1P22736 MIR2861-201ENST00000636310 90 ntBASIC17.92■□□□□ 0.46
NR4A1P22736 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR4A1P22736 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR4A1P22736 NOC2LP1-202ENST00000452600 2235 ntBASIC17.92■□□□□ 0.46
NR4A1P22736 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR4A1P22736 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR4A1P22736 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR4A1P22736 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR4A1P22736 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NR4A1P22736 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
NR4A1P22736 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.91■□□□□ 0.46
NR4A1P22736 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR4A1P22736 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
NR4A1P22736 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR4A1P22736 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR4A1P22736 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.91■□□□□ 0.46
NR4A1P22736 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR4A1P22736 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NR4A1P22736 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.91■□□□□ 0.46
NR4A1P22736 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NR4A1P22736 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR4A1P22736 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR4A1P22736 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR4A1P22736 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
NR4A1P22736 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.91■□□□□ 0.46
NR4A1P22736 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NR4A1P22736 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR4A1P22736 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR4A1P22736 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.91■□□□□ 0.46
NR4A1P22736 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR4A1P22736 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR4A1P22736 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR4A1P22736 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NR4A1P22736 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NR4A1P22736 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
NR4A1P22736 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.91■□□□□ 0.46
NR4A1P22736 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR4A1P22736 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
NR4A1P22736 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.91■□□□□ 0.46
NR4A1P22736 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NR4A1P22736 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
NR4A1P22736 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NR4A1P22736 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
NR4A1P22736 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.9■□□□□ 0.46
NR4A1P22736 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR4A1P22736 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NR4A1P22736 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NR4A1P22736 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR4A1P22736 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR4A1P22736 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.9■□□□□ 0.46
NR4A1P22736 CYP2T1P-201ENST00000432607 1285 ntBASIC17.9■□□□□ 0.46
NR4A1P22736 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.9■□□□□ 0.46
NR4A1P22736 AC133552.2-202ENST00000575694 574 ntBASIC17.9■□□□□ 0.46
NR4A1P22736 AL121832.2-201ENST00000610979 668 ntBASIC17.9■□□□□ 0.46
NR4A1P22736 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.9■□□□□ 0.46
NR4A1P22736 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.9■□□□□ 0.46
NR4A1P22736 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NR4A1P22736 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NR4A1P22736 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR4A1P22736 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR4A1P22736 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NR4A1P22736 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
NR4A1P22736 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NR4A1P22736 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.9■□□□□ 0.46
NR4A1P22736 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
NR4A1P22736 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NR4A1P22736 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NR4A1P22736 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
NR4A1P22736 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.89■□□□□ 0.46
NR4A1P22736 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
NR4A1P22736 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
NR4A1P22736 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.89■□□□□ 0.45
NR4A1P22736 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR4A1P22736 GPX1P1-201ENST00000388829 606 ntBASIC17.89■□□□□ 0.45
NR4A1P22736 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NR4A1P22736 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.89■□□□□ 0.45
NR4A1P22736 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.89■□□□□ 0.45
NR4A1P22736 AC083906.2-201ENST00000511578 360 ntBASIC17.89■□□□□ 0.45
NR4A1P22736 AC069236.1-201ENST00000604339 616 ntBASIC17.89■□□□□ 0.45
NR4A1P22736 OR10C1-204ENST00000622521 1039 ntBASIC17.89■□□□□ 0.45
NR4A1P22736 AC008694.1-202ENST00000636953 945 ntBASIC17.89■□□□□ 0.45
NR4A1P22736 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR4A1P22736 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
NR4A1P22736 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
NR4A1P22736 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.89■□□□□ 0.45
NR4A1P22736 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR4A1P22736 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR4A1P22736 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
NR4A1P22736 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.45
NR4A1P22736 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
NR4A1P22736 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.89■□□□□ 0.45
NR4A1P22736 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.89■□□□□ 0.45
NR4A1P22736 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.89■□□□□ 0.45
NR4A1P22736 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
NR4A1P22736 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
NR4A1P22736 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms