Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
VCLP18206 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.43■□□□□ 0.7
VCLP18206 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.43■□□□□ 0.7
VCLP18206 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.43■□□□□ 0.7
VCLP18206 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.43■□□□□ 0.7
VCLP18206 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
VCLP18206 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCLP18206 AC009237.14-201ENST00000609975 1594 ntBASIC19.43■□□□□ 0.7
VCLP18206 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCLP18206 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCLP18206 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VCLP18206 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VCLP18206 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
VCLP18206 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.42■□□□□ 0.7
VCLP18206 NBPF21P-201ENST00000425093 1451 ntBASIC19.42■□□□□ 0.7
VCLP18206 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCLP18206 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCLP18206 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCLP18206 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
VCLP18206 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VCLP18206 AC125437.2-201ENST00000625180 2167 ntBASIC19.42■□□□□ 0.7
VCLP18206 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.42■□□□□ 0.7
VCLP18206 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
VCLP18206 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.42■□□□□ 0.7
VCLP18206 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.42■□□□□ 0.7
VCLP18206 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.42■□□□□ 0.7
VCLP18206 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VCLP18206 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
VCLP18206 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.42■□□□□ 0.7
VCLP18206 AC004264.1-201ENST00000608354 794 ntBASIC19.42■□□□□ 0.7
VCLP18206 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCLP18206 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
VCLP18206 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VCLP18206 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.42■□□□□ 0.7
VCLP18206 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VCLP18206 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
VCLP18206 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCLP18206 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VCLP18206 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VCLP18206 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.41■□□□□ 0.7
VCLP18206 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCLP18206 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCLP18206 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.41■□□□□ 0.7
VCLP18206 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCLP18206 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
VCLP18206 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCLP18206 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
VCLP18206 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.41■□□□□ 0.7
VCLP18206 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCLP18206 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VCLP18206 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.41■□□□□ 0.7
VCLP18206 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCLP18206 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.41■□□□□ 0.7
VCLP18206 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCLP18206 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VCLP18206 NEFHP1-201ENST00000412845 2629 ntBASIC19.41■□□□□ 0.7
VCLP18206 AC018553.1-201ENST00000616682 1458 ntBASIC19.41■□□□□ 0.7
VCLP18206 AP006587.1-201ENST00000534129 1502 ntBASIC19.41■□□□□ 0.7
VCLP18206 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCLP18206 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.4■□□□□ 0.7
VCLP18206 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCLP18206 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
VCLP18206 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
VCLP18206 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCLP18206 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCLP18206 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VCLP18206 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
VCLP18206 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VCLP18206 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.4■□□□□ 0.7
VCLP18206 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VCLP18206 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.4■□□□□ 0.7
VCLP18206 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
VCLP18206 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
VCLP18206 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.4■□□□□ 0.7
VCLP18206 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCLP18206 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCLP18206 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.4■□□□□ 0.7
VCLP18206 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VCLP18206 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
VCLP18206 AP001271.2-201ENST00000624018 1556 ntBASIC19.4■□□□□ 0.7
VCLP18206 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VCLP18206 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.39■□□□□ 0.7
VCLP18206 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.39■□□□□ 0.7
VCLP18206 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
VCLP18206 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
VCLP18206 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.39■□□□□ 0.69
VCLP18206 AL158211.5-201ENST00000623583 2518 ntBASIC19.39■□□□□ 0.69
VCLP18206 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCLP18206 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCLP18206 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.39■□□□□ 0.69
VCLP18206 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCLP18206 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.39■□□□□ 0.69
VCLP18206 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCLP18206 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VCLP18206 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.39■□□□□ 0.69
VCLP18206 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
VCLP18206 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VCLP18206 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCLP18206 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VCLP18206 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms