Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
RAB40ALP0C0E4 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 AC008040.2-201ENST00000461049 708 ntBASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 KRT18P35-201ENST00000510488 1269 ntBASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAB40ALP0C0E4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 MFAP1P1-201ENST00000442257 1255 ntBASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 AC091390.4-202ENST00000476426 537 ntBASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 Z85996.1-201ENST00000494644 937 ntBASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 AL160286.2-201ENST00000567150 934 ntBASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RAB40ALP0C0E4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 ARMC10P1-201ENST00000313754 855 ntBASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 ATP5G1P1-201ENST00000448724 379 ntBASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 ECEL1P2-202ENST00000465689 757 ntBASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 AC116562.4-202ENST00000641738 218 ntBASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
RAB40ALP0C0E4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 SLC25A1P2-201ENST00000430693 912 ntBASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 CCR12P-201ENST00000446203 998 ntBASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 AC010203.1-204ENST00000548782 407 ntBASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms