Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AC026471.5-201ENST00000615068 467 ntBASIC21.16■□□□□ 0.98
CLTAP09496 HLA-A-209ENST00000638375 975 ntBASIC21.16■□□□□ 0.98
CLTAP09496 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
CLTAP09496 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLTAP09496 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLTAP09496 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLTAP09496 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLTAP09496 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CLTAP09496 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLTAP09496 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLTAP09496 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLTAP09496 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLTAP09496 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLTAP09496 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.15■□□□□ 0.98
CLTAP09496 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLTAP09496 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLTAP09496 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.15■□□□□ 0.98
CLTAP09496 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.15■□□□□ 0.98
CLTAP09496 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.15■□□□□ 0.98
CLTAP09496 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.15■□□□□ 0.98
CLTAP09496 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLTAP09496 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CLTAP09496 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLTAP09496 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CLTAP09496 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.15■□□□□ 0.98
CLTAP09496 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLTAP09496 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLTAP09496 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLTAP09496 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLTAP09496 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CLTAP09496 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLTAP09496 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.98
CLTAP09496 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.14■□□□□ 0.98
CLTAP09496 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLTAP09496 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CLTAP09496 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLTAP09496 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.14■□□□□ 0.97
CLTAP09496 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLTAP09496 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLTAP09496 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.14■□□□□ 0.97
CLTAP09496 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.14■□□□□ 0.97
CLTAP09496 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.14■□□□□ 0.97
CLTAP09496 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLTAP09496 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLTAP09496 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLTAP09496 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.14■□□□□ 0.97
CLTAP09496 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLTAP09496 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
CLTAP09496 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.14■□□□□ 0.97
CLTAP09496 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.14■□□□□ 0.97
CLTAP09496 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CLTAP09496 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.14■□□□□ 0.97
CLTAP09496 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLTAP09496 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
CLTAP09496 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLTAP09496 AC087289.5-201ENST00000586076 3175 ntBASIC21.13■□□□□ 0.97
CLTAP09496 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.13■□□□□ 0.97
CLTAP09496 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLTAP09496 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLTAP09496 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLTAP09496 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CLTAP09496 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC21.13■□□□□ 0.97
CLTAP09496 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.13■□□□□ 0.97
CLTAP09496 NUDT16P1-203ENST00000513809 620 ntBASIC21.13■□□□□ 0.97
CLTAP09496 AP003071.4-201ENST00000562276 1284 ntBASIC21.13■□□□□ 0.97
CLTAP09496 AL031985.4-201ENST00000642138 673 ntBASIC21.13■□□□□ 0.97
CLTAP09496 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLTAP09496 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLTAP09496 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.13■□□□□ 0.97
CLTAP09496 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLTAP09496 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLTAP09496 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLTAP09496 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CLTAP09496 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLTAP09496 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
CLTAP09496 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.13■□□□□ 0.97
CLTAP09496 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLTAP09496 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLTAP09496 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.12■□□□□ 0.97
CLTAP09496 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CLTAP09496 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CLTAP09496 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CLTAP09496 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC21.12■□□□□ 0.97
CLTAP09496 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLTAP09496 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLTAP09496 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLTAP09496 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.12■□□□□ 0.97
CLTAP09496 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.12■□□□□ 0.97
CLTAP09496 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLTAP09496 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.12■□□□□ 0.97
CLTAP09496 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.12■□□□□ 0.97
CLTAP09496 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLTAP09496 AC026271.3-201ENST00000571884 352 ntBASIC21.12■□□□□ 0.97
CLTAP09496 AC131212.4-201ENST00000623606 975 ntBASIC21.12■□□□□ 0.97
CLTAP09496 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CLTAP09496 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLTAP09496 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLTAP09496 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLTAP09496 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLTAP09496 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms