Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC25.55■■□□□ 1.68
COL5A2P05997 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL5A2P05997 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC25.55■■□□□ 1.68
COL5A2P05997 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC25.55■■□□□ 1.68
COL5A2P05997 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC25.55■■□□□ 1.68
COL5A2P05997 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL5A2P05997 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC25.55■■□□□ 1.68
COL5A2P05997 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC25.55■■□□□ 1.68
COL5A2P05997 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
COL5A2P05997 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
COL5A2P05997 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
COL5A2P05997 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC25.55■■□□□ 1.68
COL5A2P05997 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
COL5A2P05997 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC25.54■■□□□ 1.68
COL5A2P05997 AC004870.1-201ENST00000315132 882 ntBASIC25.54■■□□□ 1.68
COL5A2P05997 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
COL5A2P05997 PPIH-202ENST00000372549 327 ntTSL 3 BASIC25.54■■□□□ 1.68
COL5A2P05997 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC25.54■■□□□ 1.68
COL5A2P05997 TSSC2-201ENST00000450217 709 ntBASIC25.54■■□□□ 1.68
COL5A2P05997 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC25.54■■□□□ 1.68
COL5A2P05997 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC25.54■■□□□ 1.68
COL5A2P05997 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC25.54■■□□□ 1.68
COL5A2P05997 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL5A2P05997 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL5A2P05997 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL5A2P05997 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL5A2P05997 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL5A2P05997 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC25.54■■□□□ 1.68
COL5A2P05997 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC25.54■■□□□ 1.68
COL5A2P05997 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL5A2P05997 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
COL5A2P05997 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
COL5A2P05997 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL5A2P05997 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
COL5A2P05997 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
COL5A2P05997 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC25.54■■□□□ 1.68
COL5A2P05997 GOLGA2P11-201ENST00000562660 1621 ntBASIC25.54■■□□□ 1.68
COL5A2P05997 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC25.53■■□□□ 1.68
COL5A2P05997 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC25.53■■□□□ 1.68
COL5A2P05997 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC25.53■■□□□ 1.68
COL5A2P05997 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC25.53■■□□□ 1.68
COL5A2P05997 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
COL5A2P05997 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC25.53■■□□□ 1.68
COL5A2P05997 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COL5A2P05997 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL5A2P05997 AC016734.2-201ENST00000624325 1377 ntBASIC25.53■■□□□ 1.68
COL5A2P05997 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
COL5A2P05997 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC25.53■■□□□ 1.68
COL5A2P05997 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC25.53■■□□□ 1.68
COL5A2P05997 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC25.53■■□□□ 1.68
COL5A2P05997 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
COL5A2P05997 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC25.52■■□□□ 1.68
COL5A2P05997 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC25.52■■□□□ 1.68
COL5A2P05997 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL5A2P05997 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC25.52■■□□□ 1.68
COL5A2P05997 AC026310.3-201ENST00000625186 2373 ntBASIC25.52■■□□□ 1.68
COL5A2P05997 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
COL5A2P05997 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
COL5A2P05997 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC25.52■■□□□ 1.68
COL5A2P05997 AL845331.1-201ENST00000424978 1190 ntBASIC25.52■■□□□ 1.68
COL5A2P05997 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC25.52■■□□□ 1.68
COL5A2P05997 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL5A2P05997 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC25.52■■□□□ 1.68
COL5A2P05997 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC25.52■■□□□ 1.68
COL5A2P05997 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
COL5A2P05997 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC25.52■■□□□ 1.68
COL5A2P05997 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC25.52■■□□□ 1.68
COL5A2P05997 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.68
COL5A2P05997 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC25.51■■□□□ 1.67
COL5A2P05997 AC012676.1-201ENST00000574705 1949 ntBASIC25.51■■□□□ 1.67
COL5A2P05997 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC25.51■■□□□ 1.67
COL5A2P05997 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.51■■□□□ 1.67
COL5A2P05997 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL5A2P05997 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL5A2P05997 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL5A2P05997 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL5A2P05997 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL5A2P05997 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC25.51■■□□□ 1.67
COL5A2P05997 IFNL4P1-201ENST00000607083 540 ntBASIC25.51■■□□□ 1.67
COL5A2P05997 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
COL5A2P05997 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL5A2P05997 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL5A2P05997 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
COL5A2P05997 GAD2-202ENST00000376248 680 ntTSL 5 BASIC25.5■■□□□ 1.67
COL5A2P05997 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
COL5A2P05997 FAAHP1-202ENST00000446499 1238 ntBASIC25.5■■□□□ 1.67
COL5A2P05997 AC034232.1-201ENST00000506026 1064 ntBASIC25.5■■□□□ 1.67
COL5A2P05997 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC25.5■■□□□ 1.67
COL5A2P05997 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC25.5■■□□□ 1.67
COL5A2P05997 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
COL5A2P05997 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC25.5■■□□□ 1.67
COL5A2P05997 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL5A2P05997 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC25.5■■□□□ 1.67
COL5A2P05997 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL5A2P05997 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL5A2P05997 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL5A2P05997 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC25.5■■□□□ 1.67
COL5A2P05997 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC25.5■■□□□ 1.67
COL5A2P05997 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
COL5A2P05997 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms