Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VTNP04004 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.23■□□□□ 0.99
VTNP04004 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.23■□□□□ 0.99
VTNP04004 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.23■□□□□ 0.99
VTNP04004 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
VTNP04004 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
VTNP04004 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
VTNP04004 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
VTNP04004 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
VTNP04004 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 SLC25A1P2-201ENST00000430693 912 ntBASIC21.22■□□□□ 0.99
VTNP04004 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
VTNP04004 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.22■□□□□ 0.99
VTNP04004 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.22■□□□□ 0.99
VTNP04004 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
VTNP04004 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.22■□□□□ 0.99
VTNP04004 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.22■□□□□ 0.99
VTNP04004 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
VTNP04004 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.22■□□□□ 0.99
VTNP04004 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
VTNP04004 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
VTNP04004 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VTNP04004 LINC01521-201ENST00000504184 1943 ntBASIC21.21■□□□□ 0.99
VTNP04004 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
VTNP04004 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VTNP04004 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.21■□□□□ 0.99
VTNP04004 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VTNP04004 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.21■□□□□ 0.99
VTNP04004 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.21■□□□□ 0.99
VTNP04004 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.21■□□□□ 0.99
VTNP04004 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VTNP04004 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VTNP04004 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VTNP04004 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VTNP04004 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.21■□□□□ 0.99
VTNP04004 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.21■□□□□ 0.99
VTNP04004 AC007663.1-201ENST00000438948 1240 ntBASIC21.21■□□□□ 0.99
VTNP04004 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.21■□□□□ 0.99
VTNP04004 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.21■□□□□ 0.99
VTNP04004 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.21■□□□□ 0.99
VTNP04004 CKBP1-201ENST00000565489 1086 ntBASIC21.21■□□□□ 0.99
VTNP04004 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
VTNP04004 AC006011.2-201ENST00000621313 1158 ntBASIC21.21■□□□□ 0.99
VTNP04004 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
VTNP04004 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.21■□□□□ 0.99
VTNP04004 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VTNP04004 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VTNP04004 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VTNP04004 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.21■□□□□ 0.99
VTNP04004 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
VTNP04004 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
VTNP04004 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.2■□□□□ 0.99
VTNP04004 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
VTNP04004 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VTNP04004 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.2■□□□□ 0.98
VTNP04004 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
VTNP04004 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VTNP04004 ARMC10P1-201ENST00000313754 855 ntBASIC21.2■□□□□ 0.98
VTNP04004 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.2■□□□□ 0.98
VTNP04004 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VTNP04004 HMGA1P5-201ENST00000412453 271 ntBASIC21.2■□□□□ 0.98
VTNP04004 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VTNP04004 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VTNP04004 DUX4L26-201ENST00000489078 1255 ntBASIC21.2■□□□□ 0.98
VTNP04004 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VTNP04004 AL023803.3-201ENST00000615559 522 ntBASIC21.2■□□□□ 0.98
VTNP04004 AL590326.2-201ENST00000625139 305 ntBASIC21.2■□□□□ 0.98
VTNP04004 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VTNP04004 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.2■□□□□ 0.98
VTNP04004 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.2■□□□□ 0.98
VTNP04004 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
VTNP04004 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
VTNP04004 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
VTNP04004 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VTNP04004 AC104417.2-201ENST00000562989 1793 ntBASIC21.2■□□□□ 0.98
VTNP04004 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.2■□□□□ 0.98
VTNP04004 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
VTNP04004 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
VTNP04004 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VTNP04004 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.2■□□□□ 0.98
VTNP04004 KRT8P11-201ENST00000409686 1436 ntBASIC21.2■□□□□ 0.98
VTNP04004 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
VTNP04004 AC092338.2-201ENST00000568827 1415 ntBASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms