Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRGV3P03979 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.23■□□□□ 0.03
TRGV3P03979 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRGV3P03979 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.22■□□□□ 0.03
TRGV3P03979 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC15.22■□□□□ 0.03
TRGV3P03979 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.22■□□□□ 0.03
TRGV3P03979 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
TRGV3P03979 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.22■□□□□ 0.03
TRGV3P03979 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.22■□□□□ 0.03
TRGV3P03979 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.22■□□□□ 0.03
TRGV3P03979 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.22■□□□□ 0.03
TRGV3P03979 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.22■□□□□ 0.03
TRGV3P03979 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.22■□□□□ 0.03
TRGV3P03979 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.22■□□□□ 0.03
TRGV3P03979 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.22■□□□□ 0.03
TRGV3P03979 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRGV3P03979 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
TRGV3P03979 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRGV3P03979 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRGV3P03979 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRGV3P03979 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.21■□□□□ 0.03
TRGV3P03979 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.21■□□□□ 0.03
TRGV3P03979 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRGV3P03979 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRGV3P03979 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRGV3P03979 AC125437.2-201ENST00000625180 2167 ntBASIC15.21■□□□□ 0.03
TRGV3P03979 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRGV3P03979 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRGV3P03979 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRGV3P03979 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRGV3P03979 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.21■□□□□ 0.03
TRGV3P03979 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.21■□□□□ 0.03
TRGV3P03979 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TRGV3P03979 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.21■□□□□ 0.03
TRGV3P03979 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.21■□□□□ 0.03
TRGV3P03979 UBE2SP1-201ENST00000450587 669 ntBASIC15.21■□□□□ 0.03
TRGV3P03979 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRGV3P03979 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.21■□□□□ 0.03
TRGV3P03979 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.21■□□□□ 0.03
TRGV3P03979 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.21■□□□□ 0.03
TRGV3P03979 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.21■□□□□ 0.03
TRGV3P03979 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.21■□□□□ 0.03
TRGV3P03979 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.21■□□□□ 0.03
TRGV3P03979 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRGV3P03979 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRGV3P03979 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
TRGV3P03979 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRGV3P03979 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.2■□□□□ 0.02
TRGV3P03979 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.2■□□□□ 0.02
TRGV3P03979 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRGV3P03979 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.2■□□□□ 0.02
TRGV3P03979 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.2■□□□□ 0.02
TRGV3P03979 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.2■□□□□ 0.02
TRGV3P03979 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.2■□□□□ 0.02
TRGV3P03979 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.2■□□□□ 0.02
TRGV3P03979 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.2■□□□□ 0.02
TRGV3P03979 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.2■□□□□ 0.02
TRGV3P03979 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRGV3P03979 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRGV3P03979 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms