Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND3P03897 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
MT-ND3P03897 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND3P03897 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
MT-ND3P03897 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
MT-ND3P03897 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND3P03897 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND3P03897 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
MT-ND3P03897 AL138781.2-201ENST00000617896 1843 ntBASIC19.67■□□□□ 0.74
MT-ND3P03897 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND3P03897 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.67■□□□□ 0.74
MT-ND3P03897 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.67■□□□□ 0.74
MT-ND3P03897 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND3P03897 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND3P03897 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND3P03897 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND3P03897 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND3P03897 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND3P03897 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND3P03897 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.67■□□□□ 0.74
MT-ND3P03897 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
MT-ND3P03897 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
MT-ND3P03897 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
MT-ND3P03897 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND3P03897 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND3P03897 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND3P03897 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND3P03897 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
MT-ND3P03897 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND3P03897 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MT-ND3P03897 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
MT-ND3P03897 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND3P03897 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.66■□□□□ 0.74
MT-ND3P03897 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
MT-ND3P03897 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND3P03897 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND3P03897 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND3P03897 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND3P03897 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND3P03897 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND3P03897 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
MT-ND3P03897 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.66■□□□□ 0.74
MT-ND3P03897 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND3P03897 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND3P03897 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.66■□□□□ 0.74
MT-ND3P03897 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.66■□□□□ 0.74
MT-ND3P03897 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.66■□□□□ 0.74
MT-ND3P03897 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND3P03897 AC105020.6-201ENST00000621523 1217 ntBASIC19.66■□□□□ 0.74
MT-ND3P03897 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND3P03897 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND3P03897 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND3P03897 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND3P03897 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MT-ND3P03897 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
MT-ND3P03897 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
MT-ND3P03897 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
MT-ND3P03897 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND3P03897 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
MT-ND3P03897 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND3P03897 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
MT-ND3P03897 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND3P03897 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.65■□□□□ 0.74
MT-ND3P03897 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.65■□□□□ 0.74
MT-ND3P03897 KRT18P68-201ENST00000392293 1000 ntBASIC19.65■□□□□ 0.74
MT-ND3P03897 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.65■□□□□ 0.74
MT-ND3P03897 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.65■□□□□ 0.74
MT-ND3P03897 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND3P03897 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND3P03897 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.65■□□□□ 0.74
MT-ND3P03897 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.65■□□□□ 0.74
MT-ND3P03897 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND3P03897 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND3P03897 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND3P03897 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.65■□□□□ 0.74
MT-ND3P03897 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
MT-ND3P03897 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
MT-ND3P03897 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND3P03897 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
MT-ND3P03897 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND3P03897 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.65■□□□□ 0.74
MT-ND3P03897 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MT-ND3P03897 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.65■□□□□ 0.74
MT-ND3P03897 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
MT-ND3P03897 AC090340.1-201ENST00000620778 4980 ntBASIC19.64■□□□□ 0.74
MT-ND3P03897 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
MT-ND3P03897 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.64■□□□□ 0.73
MT-ND3P03897 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND3P03897 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND3P03897 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
MT-ND3P03897 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND3P03897 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND3P03897 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MT-ND3P03897 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.64■□□□□ 0.73
MT-ND3P03897 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.64■□□□□ 0.73
MT-ND3P03897 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
MT-ND3P03897 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.64■□□□□ 0.73
MT-ND3P03897 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.64■□□□□ 0.73
MT-ND3P03897 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.64■□□□□ 0.73
MT-ND3P03897 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms