Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
PDGFBP01127 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.49■□□□□ 0.71
PDGFBP01127 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.49■□□□□ 0.71
PDGFBP01127 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.49■□□□□ 0.71
PDGFBP01127 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PDGFBP01127 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFBP01127 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.49■□□□□ 0.71
PDGFBP01127 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.49■□□□□ 0.71
PDGFBP01127 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFBP01127 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PDGFBP01127 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.49■□□□□ 0.71
PDGFBP01127 KRT18P31-201ENST00000506277 1292 ntBASIC19.49■□□□□ 0.71
PDGFBP01127 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PDGFBP01127 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.49■□□□□ 0.71
PDGFBP01127 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFBP01127 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PDGFBP01127 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFBP01127 KRT8P11-201ENST00000409686 1436 ntBASIC19.49■□□□□ 0.71
PDGFBP01127 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFBP01127 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.49■□□□□ 0.71
PDGFBP01127 HLA-A-201ENST00000376802 1334 ntBASIC19.49■□□□□ 0.71
PDGFBP01127 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PDGFBP01127 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.48■□□□□ 0.71
PDGFBP01127 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFBP01127 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFBP01127 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFBP01127 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFBP01127 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.48■□□□□ 0.71
PDGFBP01127 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.48■□□□□ 0.71
PDGFBP01127 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFBP01127 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.48■□□□□ 0.71
PDGFBP01127 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFBP01127 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFBP01127 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFBP01127 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.48■□□□□ 0.71
PDGFBP01127 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.48■□□□□ 0.71
PDGFBP01127 LINC00265-3P-201ENST00000447588 903 ntBASIC19.48■□□□□ 0.71
PDGFBP01127 AL662844.1-201ENST00000546340 181 ntBASIC19.48■□□□□ 0.71
PDGFBP01127 TPSP2-201ENST00000561760 610 ntBASIC19.48■□□□□ 0.71
PDGFBP01127 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.48■□□□□ 0.71
PDGFBP01127 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.48■□□□□ 0.71
PDGFBP01127 AL162741.1-201ENST00000565563 1558 ntBASIC19.48■□□□□ 0.71
PDGFBP01127 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFBP01127 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.48■□□□□ 0.71
PDGFBP01127 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.48■□□□□ 0.71
PDGFBP01127 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PDGFBP01127 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFBP01127 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFBP01127 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFBP01127 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PDGFBP01127 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.47■□□□□ 0.71
PDGFBP01127 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFBP01127 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFBP01127 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.47■□□□□ 0.71
PDGFBP01127 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFBP01127 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFBP01127 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFBP01127 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFBP01127 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFBP01127 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFBP01127 AL590627.1-203ENST00000421194 1026 ntBASIC19.47■□□□□ 0.71
PDGFBP01127 TSPY12P-201ENST00000421279 868 ntBASIC19.47■□□□□ 0.71
PDGFBP01127 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.47■□□□□ 0.71
PDGFBP01127 AC034232.1-201ENST00000506026 1064 ntBASIC19.47■□□□□ 0.71
PDGFBP01127 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.47■□□□□ 0.71
PDGFBP01127 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.47■□□□□ 0.71
PDGFBP01127 AF228730.7-201ENST00000641842 219 ntBASIC19.47■□□□□ 0.71
PDGFBP01127 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.47■□□□□ 0.71
PDGFBP01127 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PDGFBP01127 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFBP01127 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFBP01127 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFBP01127 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PDGFBP01127 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFBP01127 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.46■□□□□ 0.71
PDGFBP01127 AC233723.2-201ENST00000623798 2106 ntBASIC19.46■□□□□ 0.71
PDGFBP01127 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PDGFBP01127 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFBP01127 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PDGFBP01127 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFBP01127 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.46■□□□□ 0.71
PDGFBP01127 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFBP01127 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PDGFBP01127 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFBP01127 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PDGFBP01127 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
PDGFBP01127 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.46■□□□□ 0.71
PDGFBP01127 BX640515.1-201ENST00000617215 977 ntBASIC19.46■□□□□ 0.71
PDGFBP01127 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.46■□□□□ 0.71
PDGFBP01127 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.46■□□□□ 0.71
PDGFBP01127 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFBP01127 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PDGFBP01127 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.46■□□□□ 0.71
PDGFBP01127 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.46■□□□□ 0.71
PDGFBP01127 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PDGFBP01127 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.45■□□□□ 0.7
PDGFBP01127 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFBP01127 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFBP01127 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.45■□□□□ 0.7
PDGFBP01127 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms