Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
RAPGEF3O95398 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
RAPGEF3O95398 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
RAPGEF3O95398 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
RAPGEF3O95398 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC29.12■■■□□ 2.25
RAPGEF3O95398 TSPY12P-201ENST00000421279 868 ntBASIC29.12■■■□□ 2.25
RAPGEF3O95398 AP000867.3-201ENST00000524675 377 ntBASIC29.12■■■□□ 2.25
RAPGEF3O95398 BMF-207ENST00000559701 630 ntTSL 3 BASIC29.12■■■□□ 2.25
RAPGEF3O95398 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC29.12■■■□□ 2.25
RAPGEF3O95398 NME4-212ENST00000621774 904 ntTSL 3 BASIC29.12■■■□□ 2.25
RAPGEF3O95398 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
RAPGEF3O95398 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC29.12■■■□□ 2.25
RAPGEF3O95398 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
RAPGEF3O95398 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
RAPGEF3O95398 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC29.11■■■□□ 2.25
RAPGEF3O95398 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
RAPGEF3O95398 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC29.11■■■□□ 2.25
RAPGEF3O95398 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC29.11■■■□□ 2.25
RAPGEF3O95398 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC29.11■■■□□ 2.25
RAPGEF3O95398 AL662844.1-201ENST00000546340 181 ntBASIC29.11■■■□□ 2.25
RAPGEF3O95398 BX640515.1-201ENST00000617215 977 ntBASIC29.11■■■□□ 2.25
RAPGEF3O95398 AC079602.3-201ENST00000623931 403 ntBASIC29.11■■■□□ 2.25
RAPGEF3O95398 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC29.11■■■□□ 2.25
RAPGEF3O95398 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC29.11■■■□□ 2.25
RAPGEF3O95398 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
RAPGEF3O95398 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
RAPGEF3O95398 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC29.1■■■□□ 2.25
RAPGEF3O95398 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
RAPGEF3O95398 DRAXINP1-201ENST00000437611 948 ntBASIC29.1■■■□□ 2.25
RAPGEF3O95398 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC29.1■■■□□ 2.25
RAPGEF3O95398 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC29.1■■■□□ 2.25
RAPGEF3O95398 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC29.1■■■□□ 2.25
RAPGEF3O95398 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC29.1■■■□□ 2.25
RAPGEF3O95398 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
RAPGEF3O95398 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC29.1■■■□□ 2.25
RAPGEF3O95398 MYB-221ENST00000527615 2381 ntTSL 5 BASIC29.1■■■□□ 2.25
RAPGEF3O95398 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
RAPGEF3O95398 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
RAPGEF3O95398 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
RAPGEF3O95398 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC29.09■■■□□ 2.25
RAPGEF3O95398 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC29.09■■■□□ 2.25
RAPGEF3O95398 CIB2-208ENST00000560618 804 ntTSL 2 BASIC29.09■■■□□ 2.25
RAPGEF3O95398 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC29.09■■■□□ 2.25
RAPGEF3O95398 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC29.09■■■□□ 2.25
RAPGEF3O95398 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
RAPGEF3O95398 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
RAPGEF3O95398 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
RAPGEF3O95398 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC29.09■■■□□ 2.25
RAPGEF3O95398 AC093525.10-201ENST00000625130 1569 ntBASIC29.09■■■□□ 2.25
RAPGEF3O95398 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC29.08■■■□□ 2.25
RAPGEF3O95398 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC29.08■■■□□ 2.25
RAPGEF3O95398 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC29.08■■■□□ 2.25
RAPGEF3O95398 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
RAPGEF3O95398 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
RAPGEF3O95398 RPP21-221ENST00000428040 594 ntTSL 2 BASIC29.08■■■□□ 2.25
RAPGEF3O95398 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
RAPGEF3O95398 LINC00265-3P-201ENST00000447588 903 ntBASIC29.08■■■□□ 2.25
RAPGEF3O95398 KRT16P4-201ENST00000453883 522 ntBASIC29.08■■■□□ 2.25
RAPGEF3O95398 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
RAPGEF3O95398 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC29.08■■■□□ 2.25
RAPGEF3O95398 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC29.08■■■□□ 2.25
RAPGEF3O95398 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC29.08■■■□□ 2.25
RAPGEF3O95398 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
RAPGEF3O95398 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
RAPGEF3O95398 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
RAPGEF3O95398 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC29.08■■■□□ 2.25
RAPGEF3O95398 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC29.08■■■□□ 2.25
RAPGEF3O95398 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
RAPGEF3O95398 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
RAPGEF3O95398 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC29.07■■■□□ 2.24
RAPGEF3O95398 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
RAPGEF3O95398 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
RAPGEF3O95398 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
RAPGEF3O95398 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
RAPGEF3O95398 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
RAPGEF3O95398 KRT18P13-201ENST00000400056 1290 ntBASIC29.07■■■□□ 2.24
RAPGEF3O95398 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
RAPGEF3O95398 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC29.07■■■□□ 2.24
RAPGEF3O95398 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC29.07■■■□□ 2.24
RAPGEF3O95398 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC29.07■■■□□ 2.24
RAPGEF3O95398 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC29.07■■■□□ 2.24
RAPGEF3O95398 AL121912.1-201ENST00000603683 238 ntBASIC29.07■■■□□ 2.24
RAPGEF3O95398 AC024243.1-201ENST00000609234 778 ntBASIC29.07■■■□□ 2.24
RAPGEF3O95398 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC29.07■■■□□ 2.24
RAPGEF3O95398 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
RAPGEF3O95398 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC29.06■■■□□ 2.24
RAPGEF3O95398 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
RAPGEF3O95398 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
RAPGEF3O95398 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
RAPGEF3O95398 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC29.06■■■□□ 2.24
RAPGEF3O95398 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
RAPGEF3O95398 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC29.06■■■□□ 2.24
RAPGEF3O95398 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC29.06■■■□□ 2.24
RAPGEF3O95398 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC29.06■■■□□ 2.24
RAPGEF3O95398 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
RAPGEF3O95398 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
RAPGEF3O95398 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC29.06■■■□□ 2.24
RAPGEF3O95398 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC29.05■■■□□ 2.24
RAPGEF3O95398 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC29.05■■■□□ 2.24
RAPGEF3O95398 AL117328.2-201ENST00000624617 1940 ntBASIC29.05■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms