Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC25.74■■□□□ 1.71
LTN1O94822 SNX5-210ENST00000481323 562 ntTSL 3 BASIC25.74■■□□□ 1.71
LTN1O94822 HYMAI.1-201ENST00000620949 238 ntBASIC25.74■■□□□ 1.71
LTN1O94822 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
LTN1O94822 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
LTN1O94822 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
LTN1O94822 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
LTN1O94822 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC25.74■■□□□ 1.71
LTN1O94822 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
LTN1O94822 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
LTN1O94822 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC25.74■■□□□ 1.71
LTN1O94822 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.74■■□□□ 1.71
LTN1O94822 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
LTN1O94822 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
LTN1O94822 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
LTN1O94822 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
LTN1O94822 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
LTN1O94822 TSPY23P-201ENST00000440136 739 ntBASIC25.73■■□□□ 1.71
LTN1O94822 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC25.73■■□□□ 1.71
LTN1O94822 LY6E-213ENST00000522528 606 ntTSL 3 BASIC25.73■■□□□ 1.71
LTN1O94822 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
LTN1O94822 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
LTN1O94822 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
LTN1O94822 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
LTN1O94822 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC25.72■■□□□ 1.71
LTN1O94822 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
LTN1O94822 HBZP1-201ENST00000354915 429 ntBASIC25.72■■□□□ 1.71
LTN1O94822 CNP-204ENST00000472031 1019 ntTSL 2 BASIC25.72■■□□□ 1.71
LTN1O94822 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC25.72■■□□□ 1.71
LTN1O94822 CR769767.2-201ENST00000622735 460 ntBASIC25.72■■□□□ 1.71
LTN1O94822 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC25.72■■□□□ 1.71
LTN1O94822 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC25.72■■□□□ 1.71
LTN1O94822 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
LTN1O94822 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC25.72■■□□□ 1.71
LTN1O94822 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC25.72■■□□□ 1.71
LTN1O94822 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LTN1O94822 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC25.72■■□□□ 1.71
LTN1O94822 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC25.72■■□□□ 1.71
LTN1O94822 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
LTN1O94822 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
LTN1O94822 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC25.72■■□□□ 1.71
LTN1O94822 TCF3P1-201ENST00000423021 1937 ntBASIC25.72■■□□□ 1.71
LTN1O94822 AC099778.1-201ENST00000568593 1911 ntBASIC25.72■■□□□ 1.71
LTN1O94822 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC25.71■■□□□ 1.71
LTN1O94822 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC25.71■■□□□ 1.71
LTN1O94822 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC25.71■■□□□ 1.71
LTN1O94822 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LTN1O94822 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LTN1O94822 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
LTN1O94822 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
LTN1O94822 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LTN1O94822 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LTN1O94822 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
LTN1O94822 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC25.71■■□□□ 1.71
LTN1O94822 DFFB-212ENST00000625756 649 ntTSL 5 BASIC25.71■■□□□ 1.71
LTN1O94822 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
LTN1O94822 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.71
LTN1O94822 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
LTN1O94822 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
LTN1O94822 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
LTN1O94822 ZNF815P-204ENST00000434898 1737 ntBASIC25.7■■□□□ 1.71
LTN1O94822 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
LTN1O94822 GCSHP2-201ENST00000560971 527 ntBASIC25.7■■□□□ 1.7
LTN1O94822 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
LTN1O94822 AL391422.3-201ENST00000603791 2761 ntBASIC25.7■■□□□ 1.7
LTN1O94822 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
LTN1O94822 ANKRD18DP-204ENST00000455355 1975 ntBASIC25.7■■□□□ 1.7
LTN1O94822 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
LTN1O94822 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
LTN1O94822 FXN-203ENST00000396366 922 ntTSL 2 BASIC25.69■■□□□ 1.7
LTN1O94822 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC25.69■■□□□ 1.7
LTN1O94822 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC25.69■■□□□ 1.7
LTN1O94822 CLN6-214ENST00000636314 442 ntTSL 3 BASIC25.69■■□□□ 1.7
LTN1O94822 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LTN1O94822 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC25.69■■□□□ 1.7
LTN1O94822 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
LTN1O94822 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC25.69■■□□□ 1.7
LTN1O94822 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
LTN1O94822 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
LTN1O94822 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC25.69■■□□□ 1.7
LTN1O94822 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC25.69■■□□□ 1.7
LTN1O94822 AC012313.10-201ENST00000623509 926 ntBASIC25.69■■□□□ 1.7
LTN1O94822 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LTN1O94822 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LTN1O94822 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC25.68■■□□□ 1.7
LTN1O94822 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LTN1O94822 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
LTN1O94822 GOLGA6L5P-202ENST00000515341 1828 ntBASIC25.68■■□□□ 1.7
LTN1O94822 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
LTN1O94822 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LTN1O94822 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
LTN1O94822 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
LTN1O94822 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC25.68■■□□□ 1.7
LTN1O94822 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LTN1O94822 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
LTN1O94822 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
LTN1O94822 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC25.67■■□□□ 1.7
LTN1O94822 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.67■■□□□ 1.7
LTN1O94822 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
LTN1O94822 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms