Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BEST1O76090 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.35■□□□□ 0.85
BEST1O76090 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
BEST1O76090 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
BEST1O76090 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
BEST1O76090 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
BEST1O76090 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.35■□□□□ 0.85
BEST1O76090 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
BEST1O76090 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
BEST1O76090 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BEST1O76090 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BEST1O76090 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
BEST1O76090 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.35■□□□□ 0.85
BEST1O76090 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST1O76090 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST1O76090 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST1O76090 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
BEST1O76090 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
BEST1O76090 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST1O76090 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.34■□□□□ 0.85
BEST1O76090 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST1O76090 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST1O76090 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST1O76090 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.34■□□□□ 0.85
BEST1O76090 AC087499.1-201ENST00000418141 1075 ntBASIC20.34■□□□□ 0.85
BEST1O76090 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST1O76090 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST1O76090 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.34■□□□□ 0.85
BEST1O76090 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.34■□□□□ 0.85
BEST1O76090 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.34■□□□□ 0.85
BEST1O76090 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.34■□□□□ 0.85
BEST1O76090 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.34■□□□□ 0.85
BEST1O76090 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
BEST1O76090 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.34■□□□□ 0.85
BEST1O76090 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BEST1O76090 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.34■□□□□ 0.85
BEST1O76090 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.34■□□□□ 0.85
BEST1O76090 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BEST1O76090 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
BEST1O76090 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
BEST1O76090 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.33■□□□□ 0.85
BEST1O76090 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
BEST1O76090 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BEST1O76090 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.33■□□□□ 0.85
BEST1O76090 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
BEST1O76090 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BEST1O76090 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BEST1O76090 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.33■□□□□ 0.85
BEST1O76090 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.33■□□□□ 0.85
BEST1O76090 MIR1238-201ENST00000408483 83 ntBASIC20.33■□□□□ 0.85
BEST1O76090 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BEST1O76090 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.33■□□□□ 0.85
BEST1O76090 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BEST1O76090 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.33■□□□□ 0.84
BEST1O76090 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
BEST1O76090 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
BEST1O76090 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
BEST1O76090 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.32■□□□□ 0.84
BEST1O76090 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BEST1O76090 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
BEST1O76090 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.32■□□□□ 0.84
BEST1O76090 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BEST1O76090 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.32■□□□□ 0.84
BEST1O76090 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BEST1O76090 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.32■□□□□ 0.84
BEST1O76090 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.32■□□□□ 0.84
BEST1O76090 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
BEST1O76090 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.32■□□□□ 0.84
BEST1O76090 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.32■□□□□ 0.84
BEST1O76090 AP000692.2-201ENST00000608391 879 ntBASIC20.32■□□□□ 0.84
BEST1O76090 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BEST1O76090 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
BEST1O76090 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
BEST1O76090 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
BEST1O76090 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.32■□□□□ 0.84
BEST1O76090 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
BEST1O76090 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
BEST1O76090 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BEST1O76090 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BEST1O76090 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.31■□□□□ 0.84
BEST1O76090 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
BEST1O76090 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.31■□□□□ 0.84
BEST1O76090 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BEST1O76090 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
BEST1O76090 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
BEST1O76090 MMP23A-201ENST00000234610 1017 ntBASIC20.31■□□□□ 0.84
BEST1O76090 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
BEST1O76090 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
BEST1O76090 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.31■□□□□ 0.84
BEST1O76090 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
BEST1O76090 AC211429.1-201ENST00000415277 523 ntBASIC20.31■□□□□ 0.84
BEST1O76090 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.31■□□□□ 0.84
BEST1O76090 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.31■□□□□ 0.84
BEST1O76090 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.31■□□□□ 0.84
BEST1O76090 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.31■□□□□ 0.84
BEST1O76090 FITM1-202ENST00000559294 800 ntBASIC20.31■□□□□ 0.84
BEST1O76090 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.31■□□□□ 0.84
BEST1O76090 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.31■□□□□ 0.84
BEST1O76090 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.31■□□□□ 0.84
BEST1O76090 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms