Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD1O75127 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD1O75127 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC24.86■■□□□ 1.57
PTCD1O75127 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC24.86■■□□□ 1.57
PTCD1O75127 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC24.86■■□□□ 1.57
PTCD1O75127 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC24.86■■□□□ 1.57
PTCD1O75127 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC24.86■■□□□ 1.57
PTCD1O75127 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD1O75127 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC24.86■■□□□ 1.57
PTCD1O75127 WDR88-203ENST00000592765 651 ntTSL 5 BASIC24.86■■□□□ 1.57
PTCD1O75127 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD1O75127 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD1O75127 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
PTCD1O75127 KRT8P11-201ENST00000409686 1436 ntBASIC24.86■■□□□ 1.57
PTCD1O75127 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PTCD1O75127 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PTCD1O75127 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.85■■□□□ 1.57
PTCD1O75127 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PTCD1O75127 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PTCD1O75127 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
PTCD1O75127 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
PTCD1O75127 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
PTCD1O75127 BET1L-202ENST00000332865 533 ntTSL 5 BASIC24.85■■□□□ 1.57
PTCD1O75127 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
PTCD1O75127 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PTCD1O75127 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC24.85■■□□□ 1.57
PTCD1O75127 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC24.85■■□□□ 1.57
PTCD1O75127 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PTCD1O75127 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PTCD1O75127 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PTCD1O75127 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
PTCD1O75127 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
PTCD1O75127 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
PTCD1O75127 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
PTCD1O75127 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PTCD1O75127 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PTCD1O75127 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PTCD1O75127 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC24.84■■□□□ 1.57
PTCD1O75127 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PTCD1O75127 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
PTCD1O75127 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PTCD1O75127 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC24.84■■□□□ 1.57
PTCD1O75127 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
PTCD1O75127 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC24.84■■□□□ 1.57
PTCD1O75127 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC24.84■■□□□ 1.57
PTCD1O75127 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
PTCD1O75127 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC24.84■■□□□ 1.57
PTCD1O75127 AC005332.1-201ENST00000577698 1310 ntBASIC24.84■■□□□ 1.57
PTCD1O75127 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PTCD1O75127 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
PTCD1O75127 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
PTCD1O75127 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
PTCD1O75127 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PTCD1O75127 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PTCD1O75127 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PTCD1O75127 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PTCD1O75127 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PTCD1O75127 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC24.83■■□□□ 1.57
PTCD1O75127 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
PTCD1O75127 NT5C-210ENST00000582160 860 ntTSL 2 BASIC24.83■■□□□ 1.57
PTCD1O75127 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
PTCD1O75127 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
PTCD1O75127 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.56
PTCD1O75127 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
PTCD1O75127 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC24.82■■□□□ 1.56
PTCD1O75127 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PTCD1O75127 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC24.82■■□□□ 1.56
PTCD1O75127 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
PTCD1O75127 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
PTCD1O75127 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC24.82■■□□□ 1.56
PTCD1O75127 SNX5-210ENST00000481323 562 ntTSL 3 BASIC24.82■■□□□ 1.56
PTCD1O75127 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC24.82■■□□□ 1.56
PTCD1O75127 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC24.82■■□□□ 1.56
PTCD1O75127 KRT126P-201ENST00000549467 1181 ntBASIC24.82■■□□□ 1.56
PTCD1O75127 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC24.82■■□□□ 1.56
PTCD1O75127 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC24.82■■□□□ 1.56
PTCD1O75127 AC008622.2-201ENST00000617006 1229 ntBASIC24.82■■□□□ 1.56
PTCD1O75127 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC24.82■■□□□ 1.56
PTCD1O75127 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC24.82■■□□□ 1.56
PTCD1O75127 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC24.82■■□□□ 1.56
PTCD1O75127 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
PTCD1O75127 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC24.81■■□□□ 1.56
PTCD1O75127 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC24.81■■□□□ 1.56
PTCD1O75127 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC24.81■■□□□ 1.56
PTCD1O75127 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
PTCD1O75127 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC24.81■■□□□ 1.56
PTCD1O75127 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PTCD1O75127 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC24.81■■□□□ 1.56
PTCD1O75127 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
PTCD1O75127 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC24.81■■□□□ 1.56
PTCD1O75127 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
PTCD1O75127 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
PTCD1O75127 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD1O75127 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD1O75127 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD1O75127 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD1O75127 AC092667.1-201ENST00000434301 2586 ntBASIC24.8■■□□□ 1.56
PTCD1O75127 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD1O75127 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
PTCD1O75127 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms