Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 AP006294.2-201ENST00000641667 209 ntBASIC22■■□□□ 1.11
CCNT1O60563 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22■■□□□ 1.11
CCNT1O60563 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC22■■□□□ 1.11
CCNT1O60563 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CCNT1O60563 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22■■□□□ 1.11
CCNT1O60563 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCNT1O60563 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22■■□□□ 1.11
CCNT1O60563 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNT1O60563 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNT1O60563 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNT1O60563 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNT1O60563 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNT1O60563 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCNT1O60563 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
CCNT1O60563 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
CCNT1O60563 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNT1O60563 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.99■■□□□ 1.11
CCNT1O60563 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCNT1O60563 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
CCNT1O60563 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNT1O60563 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CCNT1O60563 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CCNT1O60563 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNT1O60563 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
CCNT1O60563 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.98■■□□□ 1.11
CCNT1O60563 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CCNT1O60563 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNT1O60563 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNT1O60563 SDHAP1-207ENST00000440850 2000 ntBASIC21.98■■□□□ 1.11
CCNT1O60563 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNT1O60563 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNT1O60563 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNT1O60563 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCNT1O60563 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCNT1O60563 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.98■■□□□ 1.11
CCNT1O60563 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCNT1O60563 REXO2-216ENST00000544196 452 ntTSL 3 BASIC21.98■■□□□ 1.11
CCNT1O60563 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.98■■□□□ 1.11
CCNT1O60563 AL445675.2-201ENST00000620291 557 ntBASIC21.98■■□□□ 1.11
CCNT1O60563 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.98■■□□□ 1.11
CCNT1O60563 CR392000.1-201ENST00000624770 1228 ntBASIC21.98■■□□□ 1.11
CCNT1O60563 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCNT1O60563 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.98■■□□□ 1.11
CCNT1O60563 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CCNT1O60563 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.98■■□□□ 1.11
CCNT1O60563 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CCNT1O60563 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.98■■□□□ 1.11
CCNT1O60563 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CCNT1O60563 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCNT1O60563 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCNT1O60563 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CCNT1O60563 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNT1O60563 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNT1O60563 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNT1O60563 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNT1O60563 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.97■■□□□ 1.11
CCNT1O60563 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNT1O60563 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.97■■□□□ 1.11
CCNT1O60563 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCNT1O60563 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CCNT1O60563 KSR1P1-201ENST00000446298 240 ntBASIC21.97■■□□□ 1.11
CCNT1O60563 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCNT1O60563 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.97■■□□□ 1.11
CCNT1O60563 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.97■■□□□ 1.11
CCNT1O60563 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.97■■□□□ 1.11
CCNT1O60563 AC233702.5-201ENST00000584107 538 ntBASIC21.97■■□□□ 1.11
CCNT1O60563 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNT1O60563 AC073195.1-201ENST00000607241 877 ntBASIC21.97■■□□□ 1.11
CCNT1O60563 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.97■■□□□ 1.11
CCNT1O60563 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNT1O60563 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNT1O60563 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNT1O60563 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNT1O60563 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CCNT1O60563 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNT1O60563 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.96■■□□□ 1.11
CCNT1O60563 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNT1O60563 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.96■■□□□ 1.11
CCNT1O60563 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNT1O60563 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.96■■□□□ 1.11
CCNT1O60563 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCNT1O60563 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNT1O60563 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNT1O60563 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNT1O60563 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNT1O60563 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.96■■□□□ 1.11
CCNT1O60563 AC012618.2-201ENST00000428058 849 ntBASIC21.96■■□□□ 1.11
CCNT1O60563 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.96■■□□□ 1.11
CCNT1O60563 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCNT1O60563 AL160286.2-201ENST00000567150 934 ntBASIC21.96■■□□□ 1.11
CCNT1O60563 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNT1O60563 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNT1O60563 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNT1O60563 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.96■■□□□ 1.11
CCNT1O60563 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCNT1O60563 KRT16P1-201ENST00000399124 1418 ntBASIC21.96■■□□□ 1.11
CCNT1O60563 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNT1O60563 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNT1O60563 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CCNT1O60563 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms