Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PROM1O43490 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PROM1O43490 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
PROM1O43490 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.37■□□□□ 0.53
PROM1O43490 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PROM1O43490 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PROM1O43490 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PROM1O43490 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.37■□□□□ 0.53
PROM1O43490 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PROM1O43490 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PROM1O43490 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
PROM1O43490 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PROM1O43490 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PROM1O43490 PRORSD1P-201ENST00000295112 541 ntBASIC18.36■□□□□ 0.53
PROM1O43490 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PROM1O43490 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.36■□□□□ 0.53
PROM1O43490 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PROM1O43490 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PROM1O43490 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
PROM1O43490 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PROM1O43490 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PROM1O43490 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.36■□□□□ 0.53
PROM1O43490 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
PROM1O43490 RPPH1-201ENST00000516869 333 ntBASIC18.36■□□□□ 0.53
PROM1O43490 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
PROM1O43490 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.36■□□□□ 0.53
PROM1O43490 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.36■□□□□ 0.53
PROM1O43490 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.36■□□□□ 0.53
PROM1O43490 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.36■□□□□ 0.53
PROM1O43490 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.36■□□□□ 0.53
PROM1O43490 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PROM1O43490 BX323043.1-201ENST00000641006 1765 ntBASIC18.36■□□□□ 0.53
PROM1O43490 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PROM1O43490 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.35■□□□□ 0.53
PROM1O43490 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.35■□□□□ 0.53
PROM1O43490 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PROM1O43490 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PROM1O43490 ZNF815P-204ENST00000434898 1737 ntBASIC18.35■□□□□ 0.53
PROM1O43490 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PROM1O43490 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PROM1O43490 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PROM1O43490 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PROM1O43490 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.35■□□□□ 0.53
PROM1O43490 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PROM1O43490 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.35■□□□□ 0.53
PROM1O43490 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PROM1O43490 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PROM1O43490 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.35■□□□□ 0.53
PROM1O43490 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.35■□□□□ 0.53
PROM1O43490 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.35■□□□□ 0.53
PROM1O43490 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PROM1O43490 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PROM1O43490 AC005332.7-201ENST00000614046 2005 ntBASIC18.35■□□□□ 0.53
PROM1O43490 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PROM1O43490 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PROM1O43490 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PROM1O43490 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PROM1O43490 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.35■□□□□ 0.53
PROM1O43490 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PROM1O43490 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PROM1O43490 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PROM1O43490 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PROM1O43490 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PROM1O43490 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PROM1O43490 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PROM1O43490 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.34■□□□□ 0.53
PROM1O43490 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PROM1O43490 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.34■□□□□ 0.53
PROM1O43490 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PROM1O43490 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PROM1O43490 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PROM1O43490 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.34■□□□□ 0.53
PROM1O43490 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PROM1O43490 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.34■□□□□ 0.53
PROM1O43490 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PROM1O43490 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PROM1O43490 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.34■□□□□ 0.53
PROM1O43490 C1QL1P1-201ENST00000568105 661 ntBASIC18.34■□□□□ 0.53
PROM1O43490 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PROM1O43490 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.34■□□□□ 0.53
PROM1O43490 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PROM1O43490 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PROM1O43490 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PROM1O43490 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PROM1O43490 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.34■□□□□ 0.53
PROM1O43490 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PROM1O43490 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PROM1O43490 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PROM1O43490 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms