Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FOXN1O15353 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FOXN1O15353 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23.13■■□□□ 1.29
FOXN1O15353 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC23.13■■□□□ 1.29
FOXN1O15353 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.13■■□□□ 1.29
FOXN1O15353 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
FOXN1O15353 AL441883.1-201ENST00000566170 1045 ntBASIC23.13■■□□□ 1.29
FOXN1O15353 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.13■■□□□ 1.29
FOXN1O15353 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
FOXN1O15353 LINC02084-201ENST00000606069 1096 ntBASIC23.13■■□□□ 1.29
FOXN1O15353 NPAP1P7-201ENST00000613027 823 ntBASIC23.13■■□□□ 1.29
FOXN1O15353 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FOXN1O15353 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FOXN1O15353 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.13■■□□□ 1.29
FOXN1O15353 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.13■■□□□ 1.29
FOXN1O15353 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
FOXN1O15353 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
FOXN1O15353 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
FOXN1O15353 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
FOXN1O15353 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
FOXN1O15353 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
FOXN1O15353 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
FOXN1O15353 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC23.12■■□□□ 1.29
FOXN1O15353 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
FOXN1O15353 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
FOXN1O15353 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC23.12■■□□□ 1.29
FOXN1O15353 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
FOXN1O15353 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
FOXN1O15353 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
FOXN1O15353 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.12■■□□□ 1.29
FOXN1O15353 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
FOXN1O15353 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
FOXN1O15353 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC23.12■■□□□ 1.29
FOXN1O15353 PRSS44-201ENST00000515154 1146 ntBASIC23.12■■□□□ 1.29
FOXN1O15353 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.12■■□□□ 1.29
FOXN1O15353 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
FOXN1O15353 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
FOXN1O15353 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.12■■□□□ 1.29
FOXN1O15353 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
FOXN1O15353 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
FOXN1O15353 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.12■■□□□ 1.29
FOXN1O15353 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXN1O15353 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.11■■□□□ 1.29
FOXN1O15353 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC23.11■■□□□ 1.29
FOXN1O15353 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXN1O15353 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXN1O15353 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
FOXN1O15353 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
FOXN1O15353 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXN1O15353 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
FOXN1O15353 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXN1O15353 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC23.11■■□□□ 1.29
FOXN1O15353 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
FOXN1O15353 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC23.11■■□□□ 1.29
FOXN1O15353 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
FOXN1O15353 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC23.11■■□□□ 1.29
FOXN1O15353 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC23.11■■□□□ 1.29
FOXN1O15353 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXN1O15353 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
FOXN1O15353 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
FOXN1O15353 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.11■■□□□ 1.29
FOXN1O15353 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
FOXN1O15353 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC23.1■■□□□ 1.29
FOXN1O15353 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
FOXN1O15353 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXN1O15353 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXN1O15353 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXN1O15353 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXN1O15353 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC23.1■■□□□ 1.29
FOXN1O15353 AC092183.1-201ENST00000469884 875 ntBASIC23.1■■□□□ 1.29
FOXN1O15353 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC23.1■■□□□ 1.29
FOXN1O15353 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXN1O15353 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXN1O15353 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXN1O15353 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
FOXN1O15353 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC23.1■■□□□ 1.29
FOXN1O15353 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.1■■□□□ 1.29
FOXN1O15353 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
FOXN1O15353 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
FOXN1O15353 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
FOXN1O15353 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
FOXN1O15353 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
FOXN1O15353 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC23.09■■□□□ 1.29
FOXN1O15353 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
FOXN1O15353 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
FOXN1O15353 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.09■■□□□ 1.29
FOXN1O15353 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
FOXN1O15353 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
FOXN1O15353 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
FOXN1O15353 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
FOXN1O15353 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
FOXN1O15353 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
FOXN1O15353 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.09■■□□□ 1.29
FOXN1O15353 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
FOXN1O15353 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
FOXN1O15353 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC23.09■■□□□ 1.29
FOXN1O15353 KRT18P13-201ENST00000400056 1290 ntBASIC23.09■■□□□ 1.29
FOXN1O15353 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC23.09■■□□□ 1.29
FOXN1O15353 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC23.09■■□□□ 1.29
FOXN1O15353 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms