Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.74■□□□□ 0.91
SPTLC1O15269 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SPTLC1O15269 AC011298.2-201ENST00000617989 482 ntBASIC20.74■□□□□ 0.91
SPTLC1O15269 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SPTLC1O15269 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SPTLC1O15269 AC073130.3-201ENST00000624389 2278 ntBASIC20.74■□□□□ 0.91
SPTLC1O15269 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SPTLC1O15269 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SPTLC1O15269 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPTLC1O15269 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SPTLC1O15269 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPTLC1O15269 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPTLC1O15269 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
SPTLC1O15269 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPTLC1O15269 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.73■□□□□ 0.91
SPTLC1O15269 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPTLC1O15269 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPTLC1O15269 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.73■□□□□ 0.91
SPTLC1O15269 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SPTLC1O15269 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPTLC1O15269 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.73■□□□□ 0.91
SPTLC1O15269 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.73■□□□□ 0.91
SPTLC1O15269 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.73■□□□□ 0.91
SPTLC1O15269 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPTLC1O15269 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SPTLC1O15269 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC1O15269 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC1O15269 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SPTLC1O15269 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC1O15269 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC1O15269 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC1O15269 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC1O15269 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC1O15269 AC004951.3-201ENST00000418645 1148 ntBASIC20.72■□□□□ 0.91
SPTLC1O15269 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC1O15269 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.72■□□□□ 0.91
SPTLC1O15269 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.72■□□□□ 0.91
SPTLC1O15269 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.72■□□□□ 0.91
SPTLC1O15269 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC1O15269 RN7SL850P-201ENST00000579959 291 ntBASIC20.72■□□□□ 0.91
SPTLC1O15269 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.72■□□□□ 0.91
SPTLC1O15269 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC1O15269 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.72■□□□□ 0.91
SPTLC1O15269 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.72■□□□□ 0.91
SPTLC1O15269 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.72■□□□□ 0.91
SPTLC1O15269 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC1O15269 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.72■□□□□ 0.91
SPTLC1O15269 KRT8P41-201ENST00000533985 1514 ntBASIC20.72■□□□□ 0.91
SPTLC1O15269 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC1O15269 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC1O15269 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SPTLC1O15269 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SPTLC1O15269 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.71■□□□□ 0.91
SPTLC1O15269 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SPTLC1O15269 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPTLC1O15269 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.71■□□□□ 0.91
SPTLC1O15269 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.71■□□□□ 0.91
SPTLC1O15269 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPTLC1O15269 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPTLC1O15269 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.71■□□□□ 0.91
SPTLC1O15269 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.71■□□□□ 0.91
SPTLC1O15269 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.71■□□□□ 0.91
SPTLC1O15269 AP000692.2-201ENST00000608391 879 ntBASIC20.71■□□□□ 0.91
SPTLC1O15269 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.71■□□□□ 0.91
SPTLC1O15269 DGCR10-201ENST00000609839 495 ntBASIC20.71■□□□□ 0.91
SPTLC1O15269 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPTLC1O15269 TREX1-205ENST00000625293 1783 ntBASIC20.71■□□□□ 0.91
SPTLC1O15269 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SPTLC1O15269 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
SPTLC1O15269 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SPTLC1O15269 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC1O15269 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC1O15269 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC1O15269 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SPTLC1O15269 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC1O15269 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC1O15269 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC1O15269 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SPTLC1O15269 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.7■□□□□ 0.9
SPTLC1O15269 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC1O15269 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC1O15269 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.7■□□□□ 0.9
SPTLC1O15269 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.7■□□□□ 0.9
SPTLC1O15269 AC097488.1-201ENST00000507834 756 ntBASIC20.7■□□□□ 0.9
SPTLC1O15269 AC010947.1-201ENST00000623454 693 ntBASIC20.7■□□□□ 0.9
SPTLC1O15269 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC1O15269 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.7■□□□□ 0.9
SPTLC1O15269 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
SPTLC1O15269 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.7■□□□□ 0.9
SPTLC1O15269 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.7■□□□□ 0.9
SPTLC1O15269 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC1O15269 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPTLC1O15269 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.69■□□□□ 0.9
SPTLC1O15269 AC104417.2-201ENST00000562989 1793 ntBASIC20.69■□□□□ 0.9
SPTLC1O15269 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPTLC1O15269 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPTLC1O15269 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.69■□□□□ 0.9
SPTLC1O15269 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SPTLC1O15269 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.69■□□□□ 0.9
SPTLC1O15269 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms