Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC31.45■■■□□ 2.63
CHD1O14646 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CHD1O14646 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CHD1O14646 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
CHD1O14646 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CHD1O14646 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CHD1O14646 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CHD1O14646 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
CHD1O14646 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC31.44■■■□□ 2.62
CHD1O14646 AC099336.1-202ENST00000602961 463 ntBASIC31.44■■■□□ 2.62
CHD1O14646 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC31.44■■■□□ 2.62
CHD1O14646 AL049796.1-201ENST00000565336 1766 ntBASIC31.44■■■□□ 2.62
CHD1O14646 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CHD1O14646 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
CHD1O14646 AC243591.1-201ENST00000452967 1364 ntBASIC31.44■■■□□ 2.62
CHD1O14646 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CHD1O14646 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CHD1O14646 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC31.44■■■□□ 2.62
CHD1O14646 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CHD1O14646 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC31.44■■■□□ 2.62
CHD1O14646 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC31.44■■■□□ 2.62
CHD1O14646 BET1L-206ENST00000486280 665 ntTSL 3 BASIC31.44■■■□□ 2.62
CHD1O14646 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC31.44■■■□□ 2.62
CHD1O14646 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC31.44■■■□□ 2.62
CHD1O14646 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC31.44■■■□□ 2.62
CHD1O14646 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC31.44■■■□□ 2.62
CHD1O14646 AL355385.1-201ENST00000606123 409 ntBASIC31.44■■■□□ 2.62
CHD1O14646 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
CHD1O14646 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHD1O14646 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHD1O14646 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHD1O14646 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC31.43■■■□□ 2.62
CHD1O14646 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHD1O14646 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHD1O14646 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHD1O14646 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHD1O14646 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC31.43■■■□□ 2.62
CHD1O14646 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
CHD1O14646 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC31.43■■■□□ 2.62
CHD1O14646 AL136038.4-201ENST00000603606 1261 ntBASIC31.43■■■□□ 2.62
CHD1O14646 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC31.43■■■□□ 2.62
CHD1O14646 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CHD1O14646 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CHD1O14646 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CHD1O14646 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHD1O14646 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CHD1O14646 COX10-202ENST00000429152 875 ntTSL 2 BASIC31.42■■■□□ 2.62
CHD1O14646 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHD1O14646 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC31.42■■■□□ 2.62
CHD1O14646 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CHD1O14646 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
CHD1O14646 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC31.42■■■□□ 2.62
CHD1O14646 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CHD1O14646 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
CHD1O14646 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHD1O14646 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHD1O14646 TLE1-202ENST00000376484 666 ntTSL 3 BASIC31.41■■■□□ 2.62
CHD1O14646 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC31.41■■■□□ 2.62
CHD1O14646 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC31.41■■■□□ 2.62
CHD1O14646 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC31.41■■■□□ 2.62
CHD1O14646 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC31.41■■■□□ 2.62
CHD1O14646 AL157888.1-201ENST00000631930 593 ntBASIC31.41■■■□□ 2.62
CHD1O14646 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
CHD1O14646 AC233702.3-201ENST00000578656 1387 ntBASIC31.41■■■□□ 2.62
CHD1O14646 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CHD1O14646 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHD1O14646 AL024507.2-201ENST00000606070 2574 ntBASIC31.41■■■□□ 2.62
CHD1O14646 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHD1O14646 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHD1O14646 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CHD1O14646 AC073648.2-201ENST00000510116 352 ntBASIC31.41■■■□□ 2.62
CHD1O14646 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC31.41■■■□□ 2.62
CHD1O14646 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC31.41■■■□□ 2.62
CHD1O14646 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC31.4■■■□□ 2.62
CHD1O14646 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC31.4■■■□□ 2.62
CHD1O14646 AC244015.2-201ENST00000616358 1861 ntBASIC31.4■■■□□ 2.62
CHD1O14646 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC31.4■■■□□ 2.62
CHD1O14646 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CHD1O14646 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
CHD1O14646 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC31.4■■■□□ 2.62
CHD1O14646 AF238378.1-201ENST00000526806 358 ntBASIC31.4■■■□□ 2.62
CHD1O14646 LINC02084-201ENST00000606069 1096 ntBASIC31.4■■■□□ 2.62
CHD1O14646 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC31.4■■■□□ 2.62
CHD1O14646 Z98882.1-201ENST00000622160 2253 ntBASIC31.4■■■□□ 2.62
CHD1O14646 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
CHD1O14646 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC31.39■■■□□ 2.62
CHD1O14646 PMS2P2-201ENST00000425039 1128 ntBASIC31.39■■■□□ 2.62
CHD1O14646 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC31.39■■■□□ 2.62
CHD1O14646 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC31.39■■■□□ 2.62
CHD1O14646 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CHD1O14646 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC31.39■■■□□ 2.62
CHD1O14646 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC31.39■■■□□ 2.62
CHD1O14646 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CHD1O14646 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
CHD1O14646 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.61
CHD1O14646 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHD1O14646 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHD1O14646 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CHD1O14646 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC31.38■■■□□ 2.61
CHD1O14646 AC024243.1-201ENST00000609234 778 ntBASIC31.38■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms