Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN4O14493 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CLDN4O14493 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN4O14493 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.25■□□□□ 0.51
CLDN4O14493 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN4O14493 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN4O14493 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN4O14493 AL445675.2-201ENST00000620291 557 ntBASIC18.25■□□□□ 0.51
CLDN4O14493 AC131212.4-201ENST00000623606 975 ntBASIC18.25■□□□□ 0.51
CLDN4O14493 AL049637.2-201ENST00000641778 930 ntBASIC18.25■□□□□ 0.51
CLDN4O14493 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN4O14493 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CLDN4O14493 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN4O14493 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN4O14493 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN4O14493 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN4O14493 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN4O14493 TREX1-205ENST00000625293 1783 ntBASIC18.25■□□□□ 0.51
CLDN4O14493 AFG3L1P-217ENST00000557444 2447 ntBASIC18.24■□□□□ 0.51
CLDN4O14493 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN4O14493 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN4O14493 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN4O14493 KRT16P1-201ENST00000399124 1418 ntBASIC18.24■□□□□ 0.51
CLDN4O14493 AC125437.2-201ENST00000625180 2167 ntBASIC18.24■□□□□ 0.51
CLDN4O14493 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN4O14493 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN4O14493 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN4O14493 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN4O14493 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN4O14493 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN4O14493 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN4O14493 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN4O14493 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN4O14493 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN4O14493 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.24■□□□□ 0.51
CLDN4O14493 AC093827.2-201ENST00000512654 315 ntBASIC18.24■□□□□ 0.51
CLDN4O14493 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CLDN4O14493 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.24■□□□□ 0.51
CLDN4O14493 CR392000.1-201ENST00000624770 1228 ntBASIC18.24■□□□□ 0.51
CLDN4O14493 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN4O14493 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.24■□□□□ 0.51
CLDN4O14493 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN4O14493 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN4O14493 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN4O14493 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN4O14493 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN4O14493 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN4O14493 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.23■□□□□ 0.51
CLDN4O14493 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CLDN4O14493 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CLDN4O14493 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN4O14493 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN4O14493 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN4O14493 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN4O14493 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN4O14493 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN4O14493 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN4O14493 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN4O14493 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN4O14493 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CLDN4O14493 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN4O14493 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN4O14493 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.23■□□□□ 0.51
CLDN4O14493 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.23■□□□□ 0.51
CLDN4O14493 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.23■□□□□ 0.51
CLDN4O14493 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.23■□□□□ 0.51
CLDN4O14493 CD177P1-201ENST00000606252 935 ntBASIC18.23■□□□□ 0.51
CLDN4O14493 HLA-A-209ENST00000638375 975 ntBASIC18.23■□□□□ 0.51
CLDN4O14493 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CLDN4O14493 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN4O14493 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN4O14493 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN4O14493 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN4O14493 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.23■□□□□ 0.51
CLDN4O14493 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CLDN4O14493 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CLDN4O14493 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN4O14493 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.22■□□□□ 0.51
CLDN4O14493 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN4O14493 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN4O14493 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN4O14493 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN4O14493 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN4O14493 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN4O14493 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CLDN4O14493 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN4O14493 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN4O14493 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN4O14493 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN4O14493 AL160286.2-201ENST00000567150 934 ntBASIC18.22■□□□□ 0.51
CLDN4O14493 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.22■□□□□ 0.51
CLDN4O14493 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.22■□□□□ 0.51
CLDN4O14493 AL031985.4-201ENST00000642138 673 ntBASIC18.22■□□□□ 0.51
CLDN4O14493 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CLDN4O14493 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN4O14493 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN4O14493 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CLDN4O14493 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CLDN4O14493 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN4O14493 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms