Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM38O00635 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TRIM38O00635 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM38O00635 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM38O00635 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM38O00635 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM38O00635 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM38O00635 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM38O00635 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM38O00635 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM38O00635 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
TRIM38O00635 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM38O00635 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM38O00635 AC004264.1-201ENST00000608354 794 ntBASIC19.46■□□□□ 0.71
TRIM38O00635 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.46■□□□□ 0.71
TRIM38O00635 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM38O00635 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM38O00635 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM38O00635 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
TRIM38O00635 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRIM38O00635 AP000974.1-201ENST00000623909 2387 ntBASIC19.46■□□□□ 0.71
TRIM38O00635 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM38O00635 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM38O00635 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM38O00635 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM38O00635 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM38O00635 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM38O00635 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TRIM38O00635 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM38O00635 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM38O00635 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TRIM38O00635 AP002982.1-201ENST00000492365 877 ntBASIC19.45■□□□□ 0.7
TRIM38O00635 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM38O00635 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM38O00635 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.45■□□□□ 0.7
TRIM38O00635 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM38O00635 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM38O00635 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM38O00635 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM38O00635 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM38O00635 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM38O00635 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM38O00635 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM38O00635 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM38O00635 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM38O00635 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRIM38O00635 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM38O00635 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM38O00635 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM38O00635 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM38O00635 HLA-G-202ENST00000376815 851 ntBASIC19.44■□□□□ 0.7
TRIM38O00635 HLA-G-203ENST00000376818 1127 ntBASIC19.44■□□□□ 0.7
TRIM38O00635 RBM17P1-201ENST00000453646 1190 ntBASIC19.44■□□□□ 0.7
TRIM38O00635 NUDT16P1-203ENST00000513809 620 ntBASIC19.44■□□□□ 0.7
TRIM38O00635 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.44■□□□□ 0.7
TRIM38O00635 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM38O00635 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRIM38O00635 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TRIM38O00635 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM38O00635 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM38O00635 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM38O00635 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TRIM38O00635 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM38O00635 TNXA-203ENST00000507684 2038 ntBASIC19.44■□□□□ 0.7
TRIM38O00635 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM38O00635 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
TRIM38O00635 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM38O00635 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.44■□□□□ 0.7
TRIM38O00635 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM38O00635 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM38O00635 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM38O00635 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRIM38O00635 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM38O00635 KRT8P9-201ENST00000558927 1449 ntBASIC19.43■□□□□ 0.7
TRIM38O00635 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM38O00635 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRIM38O00635 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM38O00635 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM38O00635 AC079598.2-202ENST00000546624 1451 ntBASIC19.43■□□□□ 0.7
TRIM38O00635 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM38O00635 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM38O00635 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM38O00635 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM38O00635 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM38O00635 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM38O00635 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
TRIM38O00635 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM38O00635 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM38O00635 TMPOP1-202ENST00000424642 1267 ntBASIC19.43■□□□□ 0.7
TRIM38O00635 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM38O00635 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM38O00635 RN7SL850P-201ENST00000579959 291 ntBASIC19.43■□□□□ 0.7
TRIM38O00635 REXO1L10P-201ENST00000615707 1290 ntBASIC19.43■□□□□ 0.7
TRIM38O00635 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM38O00635 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
TRIM38O00635 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM38O00635 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM38O00635 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM38O00635 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM38O00635 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms