Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
EIF3FO00303 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EIF3FO00303 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.93■□□□□ 0.62
EIF3FO00303 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EIF3FO00303 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EIF3FO00303 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.93■□□□□ 0.62
EIF3FO00303 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EIF3FO00303 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
EIF3FO00303 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EIF3FO00303 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
EIF3FO00303 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.93■□□□□ 0.62
EIF3FO00303 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.93■□□□□ 0.62
EIF3FO00303 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.93■□□□□ 0.62
EIF3FO00303 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.93■□□□□ 0.62
EIF3FO00303 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.93■□□□□ 0.62
EIF3FO00303 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.93■□□□□ 0.62
EIF3FO00303 HLA-A-209ENST00000638375 975 ntBASIC18.93■□□□□ 0.62
EIF3FO00303 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EIF3FO00303 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.93■□□□□ 0.62
EIF3FO00303 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.93■□□□□ 0.62
EIF3FO00303 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.93■□□□□ 0.62
EIF3FO00303 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
EIF3FO00303 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EIF3FO00303 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EIF3FO00303 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EIF3FO00303 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.93■□□□□ 0.62
EIF3FO00303 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
EIF3FO00303 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.93■□□□□ 0.62
EIF3FO00303 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
EIF3FO00303 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
EIF3FO00303 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EIF3FO00303 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
EIF3FO00303 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EIF3FO00303 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EIF3FO00303 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
EIF3FO00303 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EIF3FO00303 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EIF3FO00303 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.92■□□□□ 0.62
EIF3FO00303 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EIF3FO00303 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EIF3FO00303 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EIF3FO00303 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
EIF3FO00303 FAM201B-201ENST00000458407 597 ntBASIC18.92■□□□□ 0.62
EIF3FO00303 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.92■□□□□ 0.62
EIF3FO00303 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
EIF3FO00303 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.92■□□□□ 0.62
EIF3FO00303 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
EIF3FO00303 ITM2C-210ENST00000620962 501 ntBASIC18.92■□□□□ 0.62
EIF3FO00303 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EIF3FO00303 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EIF3FO00303 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
EIF3FO00303 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
EIF3FO00303 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
EIF3FO00303 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
EIF3FO00303 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
EIF3FO00303 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.92■□□□□ 0.62
EIF3FO00303 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.92■□□□□ 0.62
EIF3FO00303 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.91■□□□□ 0.62
EIF3FO00303 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
EIF3FO00303 SDHAP1-207ENST00000440850 2000 ntBASIC18.91■□□□□ 0.62
EIF3FO00303 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.91■□□□□ 0.62
EIF3FO00303 AL020996.1-203ENST00000536896 2307 ntBASIC18.91■□□□□ 0.62
EIF3FO00303 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EIF3FO00303 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EIF3FO00303 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EIF3FO00303 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EIF3FO00303 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.91■□□□□ 0.62
EIF3FO00303 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
EIF3FO00303 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.91■□□□□ 0.62
EIF3FO00303 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.91■□□□□ 0.62
EIF3FO00303 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
EIF3FO00303 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.91■□□□□ 0.62
EIF3FO00303 AL160286.2-201ENST00000567150 934 ntBASIC18.91■□□□□ 0.62
EIF3FO00303 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.91■□□□□ 0.62
EIF3FO00303 AL353708.3-201ENST00000610272 989 ntBASIC18.91■□□□□ 0.62
EIF3FO00303 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.91■□□□□ 0.62
EIF3FO00303 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EIF3FO00303 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.91■□□□□ 0.62
EIF3FO00303 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
EIF3FO00303 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EIF3FO00303 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
EIF3FO00303 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.91■□□□□ 0.62
EIF3FO00303 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
EIF3FO00303 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
EIF3FO00303 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EIF3FO00303 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.91■□□□□ 0.62
EIF3FO00303 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EIF3FO00303 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.91■□□□□ 0.62
EIF3FO00303 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
EIF3FO00303 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
EIF3FO00303 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
EIF3FO00303 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.91■□□□□ 0.62
EIF3FO00303 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
EIF3FO00303 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EIF3FO00303 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EIF3FO00303 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.9■□□□□ 0.62
EIF3FO00303 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
EIF3FO00303 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
EIF3FO00303 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.9■□□□□ 0.62
EIF3FO00303 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms