Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 CR769767.2-201ENST00000622735 460 ntBASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 ME2-216ENST00000639850 2331 ntTSL 5 BASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
PLEKHD1A6NEE1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
PLEKHD1A6NEE1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
PLEKHD1A6NEE1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
PLEKHD1A6NEE1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC29.83■■■□□ 2.37
PLEKHD1A6NEE1 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
PLEKHD1A6NEE1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
PLEKHD1A6NEE1 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
PLEKHD1A6NEE1 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
PLEKHD1A6NEE1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC29.83■■■□□ 2.37
PLEKHD1A6NEE1 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
PLEKHD1A6NEE1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
PLEKHD1A6NEE1 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC29.83■■■□□ 2.37
PLEKHD1A6NEE1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC29.83■■■□□ 2.37
PLEKHD1A6NEE1 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC29.82■■■□□ 2.37
PLEKHD1A6NEE1 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC29.82■■■□□ 2.36
PLEKHD1A6NEE1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PLEKHD1A6NEE1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PLEKHD1A6NEE1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
PLEKHD1A6NEE1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC29.82■■■□□ 2.36
PLEKHD1A6NEE1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC29.82■■■□□ 2.36
PLEKHD1A6NEE1 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
PLEKHD1A6NEE1 AL645929.1-201ENST00000420084 975 ntBASIC29.82■■■□□ 2.36
PLEKHD1A6NEE1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
PLEKHD1A6NEE1 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
PLEKHD1A6NEE1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
PLEKHD1A6NEE1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
PLEKHD1A6NEE1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC29.82■■■□□ 2.36
PLEKHD1A6NEE1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC29.82■■■□□ 2.36
PLEKHD1A6NEE1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC29.82■■■□□ 2.36
PLEKHD1A6NEE1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 AC246785.2-201ENST00000432512 513 ntBASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 SKP2-204ENST00000508514 821 ntTSL 3 BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC29.81■■■□□ 2.36
PLEKHD1A6NEE1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC29.8■■■□□ 2.36
PLEKHD1A6NEE1 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PLEKHD1A6NEE1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
PLEKHD1A6NEE1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC29.8■■■□□ 2.36
PLEKHD1A6NEE1 RASA4DP-201ENST00000460726 1199 ntBASIC29.8■■■□□ 2.36
PLEKHD1A6NEE1 AC092597.1-201ENST00000487352 616 ntBASIC29.8■■■□□ 2.36
PLEKHD1A6NEE1 MIR3652-201ENST00000579335 131 ntBASIC29.8■■■□□ 2.36
PLEKHD1A6NEE1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
PLEKHD1A6NEE1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PLEKHD1A6NEE1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC29.8■■■□□ 2.36
PLEKHD1A6NEE1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
PLEKHD1A6NEE1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC29.8■■■□□ 2.36
PLEKHD1A6NEE1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC29.79■■■□□ 2.36
PLEKHD1A6NEE1 AC009237.14-201ENST00000609975 1594 ntBASIC29.79■■■□□ 2.36
PLEKHD1A6NEE1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC29.79■■■□□ 2.36
PLEKHD1A6NEE1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC29.79■■■□□ 2.36
PLEKHD1A6NEE1 AC092329.2-201ENST00000598402 547 ntBASIC29.79■■■□□ 2.36
PLEKHD1A6NEE1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
PLEKHD1A6NEE1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC29.79■■■□□ 2.36
PLEKHD1A6NEE1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC29.79■■■□□ 2.36
PLEKHD1A6NEE1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
PLEKHD1A6NEE1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC29.79■■■□□ 2.36
PLEKHD1A6NEE1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
PLEKHD1A6NEE1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC29.79■■■□□ 2.36
PLEKHD1A6NEE1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
PLEKHD1A6NEE1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
PLEKHD1A6NEE1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
PLEKHD1A6NEE1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC29.78■■■□□ 2.36
PLEKHD1A6NEE1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
PLEKHD1A6NEE1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC29.78■■■□□ 2.36
PLEKHD1A6NEE1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC29.78■■■□□ 2.36
PLEKHD1A6NEE1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC29.78■■■□□ 2.36
PLEKHD1A6NEE1 RN7SL510P-201ENST00000581311 263 ntBASIC29.78■■■□□ 2.36
PLEKHD1A6NEE1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms