Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.04■□□□□ -0
TRAV5A0A0B4J249 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TRAV5A0A0B4J249 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV5A0A0B4J249 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV5A0A0B4J249 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TRAV5A0A0B4J249 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TRAV5A0A0B4J249 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 LETM1P2-201ENST00000597330 2178 ntBASIC15.03■□□□□ -0
TRAV5A0A0B4J249 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 DUX4L16-201ENST00000555130 1264 ntBASIC15.03■□□□□ -0
TRAV5A0A0B4J249 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TRAV5A0A0B4J249 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV5A0A0B4J249 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TRAV5A0A0B4J249 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.02■□□□□ -0
TRAV5A0A0B4J249 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRAV5A0A0B4J249 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV5A0A0B4J249 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV5A0A0B4J249 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.02■□□□□ -0
TRAV5A0A0B4J249 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV5A0A0B4J249 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV5A0A0B4J249 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.02■□□□□ -0
TRAV5A0A0B4J249 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRAV5A0A0B4J249 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.02■□□□□ -0
TRAV5A0A0B4J249 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.02■□□□□ -0
TRAV5A0A0B4J249 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRAV5A0A0B4J249 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 GUK1-205ENST00000366722 850 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 CYP2T1P-201ENST00000432607 1285 ntBASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 AC034268.1-201ENST00000441047 882 ntBASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 AC069236.1-201ENST00000604339 616 ntBASIC15.01□□□□□ -0.01
TRAV5A0A0B4J249 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms