Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV9-1A0A075B6T8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 AC126763.1-201ENST00000552015 2118 ntBASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 AC004987.1-201ENST00000428627 508 ntBASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV9-1A0A075B6T8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 IRX1P1-201ENST00000438849 1838 ntBASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.52□□□□□ -0.08
TRAV9-1A0A075B6T8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV9-1A0A075B6T8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRAV9-1A0A075B6T8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV9-1A0A075B6T8 MIR6724-1-201ENST00000616420 92 ntBASIC14.52□□□□□ -0.09
TRAV9-1A0A075B6T8 MIR6724-2-201ENST00000616483 92 ntBASIC14.52□□□□□ -0.09
TRAV9-1A0A075B6T8 MIR6724-4-201ENST00000617390 92 ntBASIC14.52□□□□□ -0.09
TRAV9-1A0A075B6T8 MIR6724-3-201ENST00000622482 92 ntBASIC14.52□□□□□ -0.09
TRAV9-1A0A075B6T8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV9-1A0A075B6T8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV9-1A0A075B6T8 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV9-1A0A075B6T8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV9-1A0A075B6T8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV9-1A0A075B6T8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV9-1A0A075B6T8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV9-1A0A075B6T8 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV9-1A0A075B6T8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRAV9-1A0A075B6T8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
TRAV9-1A0A075B6T8 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-1A0A075B6T8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV9-1A0A075B6T8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRAV9-1A0A075B6T8 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-1A0A075B6T8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-1A0A075B6T8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV9-1A0A075B6T8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-1A0A075B6T8 KRT8P17-201ENST00000453110 1448 ntBASIC14.51□□□□□ -0.09
TRAV9-1A0A075B6T8 AC012313.1-201ENST00000593393 3059 ntBASIC14.51□□□□□ -0.09
TRAV9-1A0A075B6T8 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV9-1A0A075B6T8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-1A0A075B6T8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV9-1A0A075B6T8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV9-1A0A075B6T8 PGM5P4-201ENST00000421970 445 ntBASIC14.51□□□□□ -0.09
TRAV9-1A0A075B6T8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV9-1A0A075B6T8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV9-1A0A075B6T8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms