Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AL021997.2-201ENST00000615674 271 ntBASIC3.54□□□□□ -1.84
CCDC71LQ8N9Z2 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.54□□□□□ -1.84
CCDC71LQ8N9Z2 AL137100.1-201ENST00000556703 1620 ntBASIC3.54□□□□□ -1.84
CCDC71LQ8N9Z2 NOL8P1-201ENST00000508336 3529 ntBASIC3.54□□□□□ -1.84
CCDC71LQ8N9Z2 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
CCDC71LQ8N9Z2 AL592494.2-201ENST00000425455 1548 ntBASIC3.54□□□□□ -1.84
CCDC71LQ8N9Z2 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC71LQ8N9Z2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC71LQ8N9Z2 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC71LQ8N9Z2 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 RNA5SP507-201ENST00000363603 121 ntBASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AC234779.1-201ENST00000425910 285 ntBASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AC092685.1-201ENST00000447960 1243 ntBASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 RPL23AP71-201ENST00000470966 469 ntBASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 RN7SL481P-201ENST00000477764 299 ntBASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 RN7SL808P-201ENST00000496066 299 ntBASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 BNIP3P41-201ENST00000503774 571 ntBASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 OR5BC1P-201ENST00000529327 739 ntBASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AC091042.1-201ENST00000579213 173 ntBASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 MIR3176-201ENST00000582210 90 ntBASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 NF1P5-201ENST00000588287 448 ntBASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AC020910.2-201ENST00000603635 610 ntBASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AC079587.1-201ENST00000603846 277 ntBASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AP003392.5-201ENST00000607857 415 ntBASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AC064801.1-201ENST00000612025 407 ntBASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AL590396.2-201ENST00000636511 1041 ntBASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 AC083865.1-201ENST00000636634 831 ntBASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC71LQ8N9Z2 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.85
CCDC71LQ8N9Z2 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AP001486.2-201ENST00000561652 5113 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 METTL21EP-201ENST00000298105 713 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 RNA5SP397-201ENST00000391323 118 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AC097374.1-203ENST00000400783 485 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 SNRPFP1-201ENST00000414761 252 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AL158050.1-201ENST00000416077 457 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 ELOCP6-201ENST00000429066 328 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 LYPLA1P1-201ENST00000434514 622 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 EIF2S2P2-201ENST00000447161 982 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 MTND2P39-201ENST00000457230 764 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AL133477.1-201ENST00000457472 514 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 ELOCP12-201ENST00000458706 328 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 RPL23AP62-201ENST00000463396 453 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AC069499.1-201ENST00000489433 509 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AL035404.1-201ENST00000497982 568 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AC016550.1-201ENST00000505348 785 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 RNU6-334P-201ENST00000517072 102 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AP000827.1-201ENST00000527814 258 ntBASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.52□□□□□ -1.85
CCDC71LQ8N9Z2 AC107016.1-201ENST00000550463 337 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms