Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5□□□□□ -1.61
KRT78Q8N1N4 AC112220.3-201ENST00000605502 502 ntBASIC5□□□□□ -1.61
KRT78Q8N1N4 AL159169.3-201ENST00000608871 561 ntBASIC5□□□□□ -1.61
KRT78Q8N1N4 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5□□□□□ -1.61
KRT78Q8N1N4 AP000894.4-201ENST00000610185 483 ntBASIC5□□□□□ -1.61
KRT78Q8N1N4 AC090527.3-201ENST00000619041 548 ntBASIC5□□□□□ -1.61
KRT78Q8N1N4 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5□□□□□ -1.61
KRT78Q8N1N4 AC098679.4-201ENST00000624241 654 ntBASIC5□□□□□ -1.61
KRT78Q8N1N4 AC231657.1-201ENST00000624313 397 ntBASIC5□□□□□ -1.61
KRT78Q8N1N4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC5□□□□□ -1.61
KRT78Q8N1N4 FAM157B-203ENST00000639350 358 ntBASIC5□□□□□ -1.61
KRT78Q8N1N4 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
KRT78Q8N1N4 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRT78Q8N1N4 ELL2P4-201ENST00000446870 1376 ntBASIC5□□□□□ -1.61
KRT78Q8N1N4 AP000526.1-201ENST00000603308 1388 ntBASIC5□□□□□ -1.61
KRT78Q8N1N4 DDX43P2-201ENST00000604753 1354 ntBASIC5□□□□□ -1.61
KRT78Q8N1N4 AL034549.2-201ENST00000618285 3373 ntBASIC5□□□□□ -1.61
KRT78Q8N1N4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5□□□□□ -1.61
KRT78Q8N1N4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5□□□□□ -1.61
KRT78Q8N1N4 AC087359.1-201ENST00000508335 1740 ntBASIC5□□□□□ -1.61
KRT78Q8N1N4 AC093535.2-201ENST00000624769 2326 ntBASIC5□□□□□ -1.61
KRT78Q8N1N4 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
KRT78Q8N1N4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AC011493.1-201ENST00000596753 1632 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AL390316.1-201ENST00000406279 553 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 MIR1286-201ENST00000408112 78 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 RPS15AP38-201ENST00000413110 372 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 USP9YP26-201ENST00000421008 661 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 BX119904.4-201ENST00000424402 301 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AC096638.2-201ENST00000434965 711 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 MTCYBP3-201ENST00000445588 1137 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 TRBV26-201ENST00000456572 344 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AC011225.1-201ENST00000457751 369 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 RN7SL591P-201ENST00000496150 292 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 PRELID3BP7-201ENST00000503606 469 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AC147055.4-201ENST00000504399 745 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 PGAM1P13-201ENST00000507497 754 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AC104057.1-201ENST00000515547 497 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 RNU6-583P-201ENST00000516012 92 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 RNU6-678P-201ENST00000516832 109 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 PTP4A1P6-201ENST00000531034 478 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AC024940.3-201ENST00000538551 316 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AC090888.1-201ENST00000561335 1141 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 MIR4472-2-201ENST00000582069 67 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 IMMP1LP3-201ENST00000604197 224 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AL163642.2-201ENST00000604722 1019 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 AC245008.1-201ENST00000608123 476 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 MTND4P5-201ENST00000435821 1374 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 MTCO1P14-201ENST00000441695 1559 ntBASIC4.99□□□□□ -1.61
KRT78Q8N1N4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
KRT78Q8N1N4 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.98□□□□□ -1.61
KRT78Q8N1N4 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.98□□□□□ -1.61
KRT78Q8N1N4 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.98□□□□□ -1.61
KRT78Q8N1N4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.98□□□□□ -1.61
KRT78Q8N1N4 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.98□□□□□ -1.61
KRT78Q8N1N4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.98□□□□□ -1.61
KRT78Q8N1N4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.98□□□□□ -1.61
KRT78Q8N1N4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
KRT78Q8N1N4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
KRT78Q8N1N4 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.98□□□□□ -1.61
KRT78Q8N1N4 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
KRT78Q8N1N4 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.98□□□□□ -1.61
KRT78Q8N1N4 EIF4A1P3-201ENST00000411521 244 ntBASIC4.98□□□□□ -1.61
KRT78Q8N1N4 RPL35AP24-201ENST00000413846 330 ntBASIC4.98□□□□□ -1.61
KRT78Q8N1N4 AC004987.3-201ENST00000413879 771 ntBASIC4.98□□□□□ -1.61
KRT78Q8N1N4 AC009518.2-201ENST00000418056 731 ntBASIC4.98□□□□□ -1.61
KRT78Q8N1N4 AC090960.1-201ENST00000421072 306 ntBASIC4.98□□□□□ -1.61
KRT78Q8N1N4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.98□□□□□ -1.61
KRT78Q8N1N4 NIPA2P1-201ENST00000426223 976 ntBASIC4.98□□□□□ -1.61
KRT78Q8N1N4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
KRT78Q8N1N4 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms