Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 RNA5SP110-201ENST00000362638 115 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 SNORD16-201ENST00000362803 99 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 RNU6-996P-201ENST00000365438 107 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 Y_RNA.462-201ENST00000384268 102 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 RPS20P2-201ENST00000402520 389 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AL390316.1-201ENST00000406279 553 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 METTL15P3-201ENST00000415522 1221 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AL136380.1-201ENST00000447970 162 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 PPIAP7-201ENST00000454070 489 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 MTND4LP30-201ENST00000454092 297 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 HLA-DPA3-207ENST00000454398 229 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AL133351.3-201ENST00000454998 193 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 SLC25A51P1-201ENST00000468432 871 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 RPL21P99-201ENST00000480369 423 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 RN7SL561P-201ENST00000488553 281 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AC106872.3-201ENST00000495104 446 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AC063943.2-201ENST00000495697 534 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 RNU6-150P-201ENST00000516237 95 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AP001804.3-201ENST00000525146 880 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AP000620.1-201ENST00000527147 504 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AC103843.2-201ENST00000530523 682 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AC092375.1-201ENST00000550410 637 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AC092332.1-201ENST00000563684 829 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 RPL26P30-202ENST00000602923 645 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AC006557.5-201ENST00000603126 811 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AL591167.1-201ENST00000607321 456 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AC012409.4-201ENST00000612923 249 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AL732372.2-225ENST00000642124 456 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 AC233263.6-201ENST00000631132 1963 ntBASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
NPAS3Q8IXF0 ZNF652P1-201ENST00000442420 1309 ntBASIC6.65□□□□□ -1.35
NPAS3Q8IXF0 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NPAS3Q8IXF0 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NPAS3Q8IXF0 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.65□□□□□ -1.35
NPAS3Q8IXF0 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
NPAS3Q8IXF0 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NPAS3Q8IXF0 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NPAS3Q8IXF0 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
NPAS3Q8IXF0 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AL139384.2-201ENST00000613809 3590 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 RNA5SP346-201ENST00000363541 121 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 RNU6-1066P-201ENST00000363573 105 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 RNU6-777P-201ENST00000364265 104 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 Y_RNA.252-201ENST00000364556 101 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 RNU6-740P-201ENST00000364734 105 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 Y_RNA.506-201ENST00000384494 102 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 MIR130B-202ENST00000385018 82 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 MT-TW-201ENST00000387382 68 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 SSXP10-201ENST00000402595 565 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 RNU6-101P-201ENST00000410323 104 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 BRWD1P3-201ENST00000428816 390 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 AL391987.1-201ENST00000441025 200 ntBASIC6.64□□□□□ -1.35
NPAS3Q8IXF0 OSTCP8-201ENST00000445117 448 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms