Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.6□□□□□ -1.35
FOXR1Q6PIV2 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
FOXR1Q6PIV2 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.6□□□□□ -1.35
FOXR1Q6PIV2 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.6□□□□□ -1.35
FOXR1Q6PIV2 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXR1Q6PIV2 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
FOXR1Q6PIV2 ERCC6-202ENST00000374127 1782 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 ACTR3BP2-202ENST00000623630 1338 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 AL022323.4-201ENST00000623980 13120 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 Y_RNA.187-201ENST00000363918 113 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 HMGA1P8-201ENST00000414130 321 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 AC115283.1-201ENST00000427353 400 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 AC093716.1-201ENST00000435923 377 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 AL049734.2-201ENST00000441066 616 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 RN7SL379P-201ENST00000479912 293 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 AC013356.1-201ENST00000489027 564 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 AC106872.3-201ENST00000495104 446 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 PSMA2P2-201ENST00000504319 686 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 AC131392.1-201ENST00000506490 633 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 AC138866.2-201ENST00000508650 584 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 AC083906.1-201ENST00000509298 406 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 RNU6-1004P-201ENST00000516584 111 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 RN7SKP40-201ENST00000517211 242 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 NARSP2-201ENST00000518524 679 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 OR5D2P-201ENST00000524390 911 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 DLEU1_2.1-201ENST00000617920 342 ntBASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 RSC1A1-201ENST00000345034 1854 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
FOXR1Q6PIV2 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
FOXR1Q6PIV2 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.59□□□□□ -1.36
FOXR1Q6PIV2 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
FOXR1Q6PIV2 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
FOXR1Q6PIV2 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AC109780.1-201ENST00000451768 1344 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 RNU5E-1-201ENST00000362477 120 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 RNA5SP122-201ENST00000384457 108 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 RPL23AP32-201ENST00000395315 459 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 RN7SKP86-201ENST00000410454 332 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 HSPE1P1-201ENST00000421494 318 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 RPL21P110-201ENST00000433345 446 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 HMGB3P22-202ENST00000451823 572 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 Z83838.1-202ENST00000456225 839 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 PSMC1P13-201ENST00000458195 985 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 CTSLP6-201ENST00000458273 1002 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AC078785.3-201ENST00000476607 425 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AC025164.1-201ENST00000496249 478 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 RPL38P4-201ENST00000502376 214 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AC113367.2-201ENST00000505749 160 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 RNU6-1003P-201ENST00000517099 105 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 RNU6-1220P-201ENST00000517126 108 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 RN7SKP295-201ENST00000517264 153 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 RANP9-201ENST00000519957 271 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 OR5B10P-201ENST00000532869 642 ntBASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.58□□□□□ -1.36
FOXR1Q6PIV2 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms