Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 AL589647.1-201ENST00000402485 466 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 MIR548F4-201ENST00000408515 105 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 RNU6-1148P-201ENST00000410992 104 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 RPA2P2-201ENST00000419698 796 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 GAPDHP49-201ENST00000421421 961 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 PMCHL1-202ENST00000423102 261 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 RPS12P17-201ENST00000438591 377 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 AL353093.1-201ENST00000441292 436 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 AL450996.1-201ENST00000445574 1202 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 OR7E116P-201ENST00000448529 957 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 MEMO1P4-201ENST00000453590 386 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 RPL18AP17-201ENST00000455326 198 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 RN7SL329P-201ENST00000467740 299 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 RN7SL583P-201ENST00000475692 287 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 Y_RNA.718-201ENST00000517110 102 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 RN7SKP40-201ENST00000517211 242 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 TPM3P3-201ENST00000521343 354 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 AC023442.1-201ENST00000531247 422 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 APPL2-203ENST00000546731 684 ntTSL 2 BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 CKS1BP3-201ENST00000600888 237 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 AL161734.1-201ENST00000609720 557 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 MIR6837-201ENST00000620884 64 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 AL732618.1-201ENST00000623251 301 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 AC090617.10-201ENST00000624308 134 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 SRRM1P3-201ENST00000426911 2678 ntBASIC7.47□□□□□ -1.21
RC3H1Q5TC82 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
RC3H1Q5TC82 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RC3H1Q5TC82 AP000866.6-201ENST00000638898 3579 ntBASIC7.46□□□□□ -1.21
RC3H1Q5TC82 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.21
RC3H1Q5TC82 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.46□□□□□ -1.21
RC3H1Q5TC82 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
RC3H1Q5TC82 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC7.46□□□□□ -1.21
RC3H1Q5TC82 AC011369.2-201ENST00000624423 1567 ntBASIC7.46□□□□□ -1.21
RC3H1Q5TC82 AC006213.6-201ENST00000623722 4179 ntBASIC7.46□□□□□ -1.21
RC3H1Q5TC82 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC7.46□□□□□ -1.21
RC3H1Q5TC82 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
RC3H1Q5TC82 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
RC3H1Q5TC82 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 RNA5SP183-201ENST00000362452 119 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 RNU6-1066P-201ENST00000363573 105 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 Y_RNA.231-201ENST00000364358 102 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 RNA5SP131-201ENST00000365452 119 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AC009804.1-201ENST00000400949 179 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 RPA3-203ENST00000401447 414 ntTSL 3 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 MYL6P5-201ENST00000412707 459 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 TMBIM7P-201ENST00000418074 855 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 CBX1P1-201ENST00000440184 427 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AC103563.5-201ENST00000455643 364 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 RNU6-261P-201ENST00000459506 102 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 RN7SL352P-201ENST00000466002 277 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AC005532.2-201ENST00000467154 373 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AC100832.1-201ENST00000471945 383 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AC010301.1-201ENST00000473936 355 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 RN7SL826P-201ENST00000479724 288 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AC114797.1-201ENST00000514003 728 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 RNA5SP401-201ENST00000515920 127 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 RNU6-1137P-201ENST00000517073 99 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AC138915.2-201ENST00000569776 97 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 TXNP4-201ENST00000575018 310 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 Z84480.1-201ENST00000605131 311 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AC113194.1-201ENST00000606037 500 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AL512329.2-201ENST00000607350 548 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 U6.107-201ENST00000637108 79 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms