Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 AC021146.8-201ENST00000507455 733 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 AC021146.3-201ENST00000511911 260 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.37□□□□□ -1.71
EFNB1P98172 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.37□□□□□ -1.71
EFNB1P98172 RNA5SP43-201ENST00000516559 110 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 RNU6-709P-201ENST00000517257 104 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 AC105185.1-201ENST00000518705 535 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 AP000926.4-201ENST00000527351 454 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
EFNB1P98172 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.37□□□□□ -1.71
EFNB1P98172 OR4A12P-201ENST00000530847 918 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 AC027544.3-201ENST00000535082 757 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 AC090022.1-201ENST00000546569 311 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 AC125611.1-201ENST00000549563 229 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 NMNAT1P1-201ENST00000554095 876 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 AL161713.1-201ENST00000555538 145 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 RPL21P7-201ENST00000557463 483 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.37□□□□□ -1.71
EFNB1P98172 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.37□□□□□ -1.71
EFNB1P98172 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.37□□□□□ -1.71
EFNB1P98172 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.37□□□□□ -1.71
EFNB1P98172 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
EFNB1P98172 AC010424.2-201ENST00000607594 443 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 AL353600.1-201ENST00000608148 251 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 AP001521.1-201ENST00000609150 300 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 AC116651.1-201ENST00000609724 556 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 AL022401.1-201ENST00000619498 108 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.37□□□□□ -1.71
EFNB1P98172 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.37□□□□□ -1.71
EFNB1P98172 AC099494.2-201ENST00000623371 978 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.37□□□□□ -1.71
EFNB1P98172 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.37□□□□□ -1.71
EFNB1P98172 CASC19-222ENST00000641321 1173 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
EFNB1P98172 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
EFNB1P98172 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
EFNB1P98172 AL122126.1-201ENST00000546905 1318 ntBASIC4.37□□□□□ -1.71
EFNB1P98172 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
EFNB1P98172 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
EFNB1P98172 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.37□□□□□ -1.71
EFNB1P98172 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
EFNB1P98172 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
EFNB1P98172 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.37□□□□□ -1.71
EFNB1P98172 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
EFNB1P98172 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
EFNB1P98172 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
EFNB1P98172 EOGT-210ENST00000615922 1931 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
EFNB1P98172 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
EFNB1P98172 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
EFNB1P98172 AL672167.1-203ENST00000641299 2975 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
EFNB1P98172 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
EFNB1P98172 RN7SKP104-201ENST00000362605 328 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 RNU1-43P-201ENST00000365052 165 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 RNU6-1226P-201ENST00000384317 107 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 AL589647.1-201ENST00000402485 466 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 DUTP5-201ENST00000406790 469 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 AL450338.1-201ENST00000407987 512 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.36□□□□□ -1.71
EFNB1P98172 AL133384.1-201ENST00000412744 351 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.36□□□□□ -1.71
EFNB1P98172 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC4.36□□□□□ -1.71
EFNB1P98172 AC062016.2-201ENST00000420950 676 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 DDX39BP1-205ENST00000422507 192 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 AL645608.4-201ENST00000423619 154 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.36□□□□□ -1.71
EFNB1P98172 AL451139.1-201ENST00000434718 346 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
EFNB1P98172 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.36□□□□□ -1.71
EFNB1P98172 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.36□□□□□ -1.71
EFNB1P98172 RPL23AP16-201ENST00000441715 421 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.36□□□□□ -1.71
EFNB1P98172 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.36□□□□□ -1.71
EFNB1P98172 AC087385.1-201ENST00000475062 312 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.36□□□□□ -1.71
EFNB1P98172 RPL7P38-201ENST00000488396 739 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 AP000563.1-201ENST00000490865 758 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.36□□□□□ -1.71
EFNB1P98172 HMGB1P28-201ENST00000507778 552 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 AC016065.2-201ENST00000514530 444 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 AC104057.1-201ENST00000515547 497 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 RN7SKP70-201ENST00000516655 271 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 HMGB1P19-201ENST00000517578 577 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.36□□□□□ -1.71
EFNB1P98172 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.36□□□□□ -1.71
EFNB1P98172 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
EFNB1P98172 ZNF705CP-201ENST00000530515 889 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.36□□□□□ -1.71
EFNB1P98172 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.36□□□□□ -1.71
EFNB1P98172 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.36□□□□□ -1.71
EFNB1P98172 LSM6P2-201ENST00000552208 177 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 AL389895.1-201ENST00000554127 252 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.36□□□□□ -1.71
EFNB1P98172 TVP23CP2-201ENST00000571473 623 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 HNRNPCP4-201ENST00000571636 900 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 RN7SL802P-201ENST00000577858 299 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 SNORA74C-1-201ENST00000580726 201 ntBASIC4.36□□□□□ -1.71
EFNB1P98172 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms