Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.54□□□□□ -1.52
YBX1P67809 AC021678.3-201ENST00000517893 476 ntBASIC5.54□□□□□ -1.52
YBX1P67809 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.54□□□□□ -1.52
YBX1P67809 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.54□□□□□ -1.52
YBX1P67809 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.54□□□□□ -1.52
YBX1P67809 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.54□□□□□ -1.52
YBX1P67809 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.54□□□□□ -1.52
YBX1P67809 OR5AN2P-201ENST00000534535 896 ntBASIC5.54□□□□□ -1.52
YBX1P67809 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.54□□□□□ -1.52
YBX1P67809 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
YBX1P67809 AL390334.1-201ENST00000556395 450 ntBASIC5.54□□□□□ -1.52
YBX1P67809 AC009977.1-201ENST00000586015 570 ntBASIC5.54□□□□□ -1.52
YBX1P67809 SUGT1P3-202ENST00000604259 383 ntBASIC5.54□□□□□ -1.52
YBX1P67809 BNIP3P10-201ENST00000605360 577 ntBASIC5.54□□□□□ -1.52
YBX1P67809 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC5.54□□□□□ -1.52
YBX1P67809 AL136295.6-201ENST00000610486 658 ntBASIC5.54□□□□□ -1.52
YBX1P67809 RN7SL544P-201ENST00000617232 284 ntBASIC5.54□□□□□ -1.52
YBX1P67809 RN7SL763P-201ENST00000620922 284 ntBASIC5.54□□□□□ -1.52
YBX1P67809 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.54□□□□□ -1.52
YBX1P67809 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.54□□□□□ -1.52
YBX1P67809 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
YBX1P67809 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.54□□□□□ -1.52
YBX1P67809 NLRP3P1-201ENST00000622303 1785 ntBASIC5.54□□□□□ -1.52
YBX1P67809 AL161912.4-201ENST00000623889 2468 ntBASIC5.54□□□□□ -1.52
YBX1P67809 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
YBX1P67809 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC5.54□□□□□ -1.52
YBX1P67809 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
YBX1P67809 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
YBX1P67809 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.53□□□□□ -1.52
YBX1P67809 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
YBX1P67809 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
YBX1P67809 SRRM1P3-201ENST00000426911 2678 ntBASIC5.53□□□□□ -1.52
YBX1P67809 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
YBX1P67809 GDI2P1-201ENST00000429312 1336 ntBASIC5.53□□□□□ -1.52
YBX1P67809 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
YBX1P67809 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
YBX1P67809 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
YBX1P67809 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.53□□□□□ -1.52
YBX1P67809 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
YBX1P67809 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.53□□□□□ -1.52
YBX1P67809 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.53□□□□□ -1.52
YBX1P67809 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
YBX1P67809 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.53□□□□□ -1.52
YBX1P67809 RNU6-462P-201ENST00000362659 105 ntBASIC5.53□□□□□ -1.52
YBX1P67809 RN7SKP185-201ENST00000362813 326 ntBASIC5.53□□□□□ -1.52
YBX1P67809 MIR130A-201ENST00000385274 89 ntBASIC5.53□□□□□ -1.52
YBX1P67809 U8.14-201ENST00000390843 143 ntBASIC5.53□□□□□ -1.52
YBX1P67809 RNA5SP178-201ENST00000410380 128 ntBASIC5.53□□□□□ -1.52
YBX1P67809 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.53□□□□□ -1.52
YBX1P67809 AMD1P2-201ENST00000412936 992 ntBASIC5.53□□□□□ -1.52
YBX1P67809 AL354751.2-201ENST00000415471 210 ntBASIC5.53□□□□□ -1.52
YBX1P67809 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.53□□□□□ -1.52
YBX1P67809 AL662874.1-201ENST00000426065 230 ntBASIC5.53□□□□□ -1.52
YBX1P67809 RPL23AP19-201ENST00000436229 369 ntBASIC5.53□□□□□ -1.52
YBX1P67809 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.53□□□□□ -1.52
YBX1P67809 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.53□□□□□ -1.52
YBX1P67809 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.53□□□□□ -1.52
YBX1P67809 GAPDHP17-201ENST00000449858 1001 ntBASIC5.53□□□□□ -1.52
YBX1P67809 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.53□□□□□ -1.52
YBX1P67809 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.53□□□□□ -1.52
YBX1P67809 RNU6-885P-201ENST00000516607 104 ntBASIC5.53□□□□□ -1.52
YBX1P67809 HMGB1P23-201ENST00000518743 568 ntBASIC5.53□□□□□ -1.52
YBX1P67809 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.53□□□□□ -1.52
YBX1P67809 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.53□□□□□ -1.52
YBX1P67809 AP003072.1-201ENST00000531740 145 ntBASIC5.53□□□□□ -1.52
YBX1P67809 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.53□□□□□ -1.52
YBX1P67809 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.53□□□□□ -1.52
YBX1P67809 POLR2KP1-201ENST00000553226 168 ntBASIC5.53□□□□□ -1.52
YBX1P67809 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.53□□□□□ -1.52
YBX1P67809 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.53□□□□□ -1.52
YBX1P67809 MIR3671-201ENST00000580455 88 ntBASIC5.53□□□□□ -1.52
YBX1P67809 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC5.53□□□□□ -1.52
YBX1P67809 AC010928.3-201ENST00000587712 541 ntBASIC5.53□□□□□ -1.52
YBX1P67809 AP001429.1-201ENST00000602568 530 ntBASIC5.53□□□□□ -1.52
YBX1P67809 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.53□□□□□ -1.52
YBX1P67809 RNA5SP439-201ENST00000617595 124 ntBASIC5.53□□□□□ -1.52
YBX1P67809 AC006065.6-201ENST00000625201 545 ntBASIC5.53□□□□□ -1.52
YBX1P67809 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
YBX1P67809 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.53□□□□□ -1.52
YBX1P67809 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
YBX1P67809 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
YBX1P67809 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
YBX1P67809 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
YBX1P67809 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
YBX1P67809 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
YBX1P67809 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
YBX1P67809 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.53□□□□□ -1.52
YBX1P67809 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
YBX1P67809 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
YBX1P67809 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
YBX1P67809 AC068870.1-201ENST00000563737 2455 ntBASIC5.52□□□□□ -1.53
YBX1P67809 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.52□□□□□ -1.53
YBX1P67809 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
YBX1P67809 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
YBX1P67809 MTCO1P14-201ENST00000441695 1559 ntBASIC5.52□□□□□ -1.53
YBX1P67809 Y_RNA.1-201ENST00000352915 104 ntBASIC5.52□□□□□ -1.53
YBX1P67809 MIR375-201ENST00000362103 64 ntBASIC5.52□□□□□ -1.53
YBX1P67809 RNU6-492P-201ENST00000363035 104 ntBASIC5.52□□□□□ -1.53
YBX1P67809 Y_RNA.326-201ENST00000365176 113 ntBASIC5.52□□□□□ -1.53
YBX1P67809 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms