Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
HOXD13P35453 AC009951.1-201ENST00000623674 2614 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 MAPK10-286ENST00000641208 8747 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 AC008079.2-201ENST00000623543 20396 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD13P35453 AC067945.1-201ENST00000342609 618 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
HOXD13P35453 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD13P35453 RPL37P18-201ENST00000411602 243 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.77□□□□□ -1.65
HOXD13P35453 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXD13P35453 UBTFL3-201ENST00000418934 1024 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXD13P35453 VN1R32P-201ENST00000452234 905 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 MTND2P28-201ENST00000457540 1044 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 RNU7-140P-201ENST00000459546 60 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 RN7SL98P-201ENST00000462271 300 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 UBTFL6-201ENST00000477929 1024 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXD13P35453 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD13P35453 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXD13P35453 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXD13P35453 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXD13P35453 AC008694.2-201ENST00000517591 306 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXD13P35453 AF279873.1-201ENST00000523393 313 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.77□□□□□ -1.65
HOXD13P35453 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
HOXD13P35453 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXD13P35453 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HOXD13P35453 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXD13P35453 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.77□□□□□ -1.65
HOXD13P35453 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXD13P35453 MTCO1P40-201ENST00000574371 625 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 MIR4700-201ENST00000578311 74 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 MIR5096-201ENST00000583713 70 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 AC017100.2-201ENST00000584628 355 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 AC005191.1-201ENST00000603950 358 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 AC133552.5-201ENST00000604266 540 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXD13P35453 AL021997.2-201ENST00000615674 271 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 AL121873.1-201ENST00000616013 524 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXD13P35453 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.77□□□□□ -1.65
HOXD13P35453 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD13P35453 EIF2AP4-201ENST00000424793 1781 ntBASIC4.77□□□□□ -1.65
HOXD13P35453 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HOXD13P35453 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HOXD13P35453 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HOXD13P35453 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.77□□□□□ -1.65
HOXD13P35453 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD13P35453 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HOXD13P35453 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HOXD13P35453 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
HOXD13P35453 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXD13P35453 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXD13P35453 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXD13P35453 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXD13P35453 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXD13P35453 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXD13P35453 RNU6-353P-201ENST00000364266 108 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
HOXD13P35453 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD13P35453 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD13P35453 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD13P35453 CNOT7P1-201ENST00000429006 852 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD13P35453 MTCYBP15-201ENST00000433123 1127 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 AC234064.1-201ENST00000436312 247 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXD13P35453 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXD13P35453 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD13P35453 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXD13P35453 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXD13P35453 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD13P35453 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXD13P35453 RPL7AP28-201ENST00000464513 571 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 RN7SL41P-201ENST00000476144 297 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXD13P35453 TCP11X3P-202ENST00000514289 1254 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXD13P35453 RNU6-416P-201ENST00000516265 103 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 AC090819.1-201ENST00000523800 1111 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HOXD13P35453 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXD13P35453 HMGB3P26-201ENST00000560051 582 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.76□□□□□ -1.65
HOXD13P35453 AP001542.2-201ENST00000593141 364 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD13P35453 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXD13P35453 AC002487.1-201ENST00000604565 994 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 AC113403.1-201ENST00000604910 193 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXD13P35453 AC112503.1-201ENST00000608436 391 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 AF129408.1-201ENST00000608767 431 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 AC019193.2-201ENST00000610012 634 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 AL138721.1-201ENST00000616756 179 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 uc_338.13-201ENST00000618243 179 ntBASIC4.76□□□□□ -1.65
HOXD13P35453 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms