Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 CYCSP20-201ENST00000473154 315 ntBASIC4.57□□□□□ -1.68
CTNNA1P35221 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTNNA1P35221 AC108145.1-201ENST00000503770 153 ntBASIC4.57□□□□□ -1.68
CTNNA1P35221 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTNNA1P35221 AC112518.2-201ENST00000508565 425 ntBASIC4.57□□□□□ -1.68
CTNNA1P35221 AC104115.2-201ENST00000523026 687 ntBASIC4.57□□□□□ -1.68
CTNNA1P35221 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.57□□□□□ -1.68
CTNNA1P35221 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CTNNA1P35221 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.57□□□□□ -1.68
CTNNA1P35221 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.57□□□□□ -1.68
CTNNA1P35221 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
CTNNA1P35221 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.57□□□□□ -1.68
CTNNA1P35221 AC017100.2-201ENST00000584628 355 ntBASIC4.57□□□□□ -1.68
CTNNA1P35221 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CTNNA1P35221 VN1R88P-201ENST00000596787 292 ntBASIC4.57□□□□□ -1.68
CTNNA1P35221 AP001160.4-201ENST00000596971 382 ntBASIC4.57□□□□□ -1.68
CTNNA1P35221 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.57□□□□□ -1.68
CTNNA1P35221 AC079587.1-201ENST00000603846 277 ntBASIC4.57□□□□□ -1.68
CTNNA1P35221 MIR432-201ENST00000606207 94 ntBASIC4.57□□□□□ -1.68
CTNNA1P35221 AL162574.2-201ENST00000614618 657 ntBASIC4.57□□□□□ -1.68
CTNNA1P35221 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.57□□□□□ -1.68
CTNNA1P35221 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.57□□□□□ -1.68
CTNNA1P35221 AL049536.1-201ENST00000625043 744 ntBASIC4.57□□□□□ -1.68
CTNNA1P35221 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC4.57□□□□□ -1.68
CTNNA1P35221 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC4.57□□□□□ -1.68
CTNNA1P35221 FP325313.1-201ENST00000638228 703 ntBASIC4.57□□□□□ -1.68
CTNNA1P35221 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.57□□□□□ -1.68
CTNNA1P35221 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CTNNA1P35221 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
CTNNA1P35221 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.57□□□□□ -1.68
CTNNA1P35221 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTNNA1P35221 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTNNA1P35221 MTCO1P6-201ENST00000481192 1384 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.56□□□□□ -1.68
CTNNA1P35221 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.56□□□□□ -1.68
CTNNA1P35221 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.56□□□□□ -1.68
CTNNA1P35221 RNU1-130P-201ENST00000363930 160 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 RNU6-481P-201ENST00000384194 107 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CTNNA1P35221 AC097374.1-203ENST00000400783 485 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.56□□□□□ -1.68
CTNNA1P35221 SNRPFP1-201ENST00000414761 252 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 AL139095.3-201ENST00000419672 1203 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 RBMY1KP-201ENST00000423480 476 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTNNA1P35221 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.56□□□□□ -1.68
CTNNA1P35221 ELOCP8-201ENST00000439309 332 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 ELOCP15-201ENST00000442090 332 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 RPL23AP33-201ENST00000442301 452 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTNNA1P35221 AL162591.2-201ENST00000449634 317 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 FGF7P3-201ENST00000454645 303 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 HMGB3P30-201ENST00000457863 606 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.56□□□□□ -1.68
CTNNA1P35221 AC078857.1-201ENST00000469870 667 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.56□□□□□ -1.68
CTNNA1P35221 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTNNA1P35221 GAPDHP36-201ENST00000480688 918 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 RN7SL812P-201ENST00000493791 279 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 AC139783.2-201ENST00000504847 1145 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 HPRT1P2-201ENST00000505250 544 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 ATP1B1P1-201ENST00000509767 915 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.56□□□□□ -1.68
CTNNA1P35221 AC016065.2-201ENST00000514530 444 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 RNU4-60P-201ENST00000517239 135 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.56□□□□□ -1.68
CTNNA1P35221 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.56□□□□□ -1.68
CTNNA1P35221 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.56□□□□□ -1.68
CTNNA1P35221 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.56□□□□□ -1.68
CTNNA1P35221 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.56□□□□□ -1.68
CTNNA1P35221 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.56□□□□□ -1.68
CTNNA1P35221 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.56□□□□□ -1.68
CTNNA1P35221 BNIP3P4-201ENST00000604946 565 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 MIR8084-201ENST00000614105 89 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 AL713922.2-201ENST00000619384 716 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 AC007546.1-201ENST00000619452 559 ntBASIC4.56□□□□□ -1.68
CTNNA1P35221 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.56□□□□□ -1.68
CTNNA1P35221 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CTNNA1P35221 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTNNA1P35221 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTNNA1P35221 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTNNA1P35221 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CTNNA1P35221 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CTNNA1P35221 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CTNNA1P35221 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CTNNA1P35221 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.55□□□□□ -1.68
CTNNA1P35221 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTNNA1P35221 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTNNA1P35221 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.55□□□□□ -1.68
CTNNA1P35221 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CTNNA1P35221 RNA5SP388-201ENST00000362584 119 ntBASIC4.55□□□□□ -1.68
CTNNA1P35221 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.55□□□□□ -1.68
CTNNA1P35221 RN7SKP278-201ENST00000410504 342 ntBASIC4.55□□□□□ -1.68
CTNNA1P35221 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.55□□□□□ -1.68
CTNNA1P35221 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.55□□□□□ -1.68
CTNNA1P35221 UQCRBP1-201ENST00000421129 336 ntBASIC4.55□□□□□ -1.68
CTNNA1P35221 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.55□□□□□ -1.68
CTNNA1P35221 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.55□□□□□ -1.68
CTNNA1P35221 FAR2P4-202ENST00000425399 584 ntBASIC4.55□□□□□ -1.68
CTNNA1P35221 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms