Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AC011374.2-201ENST00000607135 526 ntBASIC5.48□□□□□ -1.53
HLA-DOAP06340 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
HLA-DOAP06340 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
HLA-DOAP06340 DDX18P6-201ENST00000450119 1997 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DOAP06340 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 MTND5P23-201ENST00000430812 1655 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 MFSD8-242ENST00000641690 4199 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DOAP06340 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DOAP06340 AP000526.1-201ENST00000603308 1388 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DOAP06340 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DOAP06340 Y_RNA.77-201ENST00000362962 107 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 RNU6-553P-201ENST00000364047 96 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 RNU6-353P-201ENST00000364266 108 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 SNORA70.2-201ENST00000364506 135 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 RNU6-157P-201ENST00000383957 107 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 RNA5SP187-201ENST00000384400 119 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 TMBIM7P-201ENST00000418074 855 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 AL592293.2-201ENST00000422292 996 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 RPL7P57-201ENST00000423238 740 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 EIF4HP2-201ENST00000424380 563 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 NPM1P33-201ENST00000438918 872 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 MTND1P1-201ENST00000445453 368 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 CALM1P2-201ENST00000452941 448 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 NDUFAF4P4-201ENST00000454883 502 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 ANKRD26P4-201ENST00000455755 950 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 AC104689.1-201ENST00000473356 768 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 RPL7AP10-201ENST00000481016 791 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 AC108120.2-201ENST00000512973 294 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 AC105185.1-201ENST00000518705 535 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HLA-DOAP06340 MTCO3P15-201ENST00000526563 574 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 RFPL1S-203ENST00000539579 330 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 AC115286.1-201ENST00000604298 434 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 AL021997.1-201ENST00000605757 193 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 AP000254.1-201ENST00000609934 520 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 AC073114.1-201ENST00000612027 490 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 AC105227.2-201ENST00000615075 605 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 LINC01808-202ENST00000641680 1116 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.47□□□□□ -1.53
HLA-DOAP06340 AL359922.3-201ENST00000624779 1670 ntBASIC5.47□□□□□ -1.53
HLA-DOAP06340 SGO1P2-201ENST00000429458 1589 ntBASIC5.46□□□□□ -1.53
HLA-DOAP06340 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.46□□□□□ -1.53
HLA-DOAP06340 NCOA4P2-201ENST00000340589 1813 ntBASIC5.46□□□□□ -1.53
HLA-DOAP06340 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
HLA-DOAP06340 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
HLA-DOAP06340 DNAJC19P6-201ENST00000401853 280 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 AL049693.1-201ENST00000402760 611 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HLA-DOAP06340 RNU4-25P-201ENST00000410569 230 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.46□□□□□ -1.54
HLA-DOAP06340 IFNNP1-201ENST00000429219 553 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.46□□□□□ -1.54
HLA-DOAP06340 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DOAP06340 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DOAP06340 SNRPCP3-201ENST00000474888 476 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 AC090686.1-201ENST00000481577 749 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 OR11I1P-201ENST00000486033 954 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
HLA-DOAP06340 MTND3P5-201ENST00000512798 333 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 RNA5SP230-201ENST00000517039 122 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 IGHV3-63-201ENST00000518422 341 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 AC020937.1-201ENST00000519677 1013 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 AC105233.3-201ENST00000531125 744 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DOAP06340 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.46□□□□□ -1.54
HLA-DOAP06340 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.46□□□□□ -1.54
HLA-DOAP06340 CYP2C60P-201ENST00000566088 139 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.46□□□□□ -1.54
HLA-DOAP06340 AGGF1P4-201ENST00000568249 801 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 MIR3915-201ENST00000578518 97 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.46□□□□□ -1.54
HLA-DOAP06340 AL031281.1-201ENST00000604049 488 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 RN7SKP299-201ENST00000606679 301 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 OR2BH1P-201ENST00000608850 864 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 AC012409.3-201ENST00000611343 981 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 AC099842.1-201ENST00000619919 596 ntBASIC5.46□□□□□ -1.54
HLA-DOAP06340 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
HLA-DOAP06340 ZNF663P-202ENST00000641770 1131 ntBASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms