Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ELL2P3-201ENST00000457883 1602 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SMAD6O43541 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SMAD6O43541 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SMAD6O43541 KARSP3-201ENST00000571212 1504 ntBASIC4.7□□□□□ -1.66
SMAD6O43541 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SMAD6O43541 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SMAD6O43541 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
SMAD6O43541 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SMAD6O43541 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SMAD6O43541 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SMAD6O43541 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.69□□□□□ -1.66
SMAD6O43541 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SMAD6O43541 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SMAD6O43541 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.69□□□□□ -1.66
SMAD6O43541 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMAD6O43541 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SMAD6O43541 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SMAD6O43541 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SMAD6O43541 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.69□□□□□ -1.66
SMAD6O43541 Y_RNA.51-201ENST00000362725 102 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 RNU6-252P-201ENST00000363232 107 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 RNU5B-1-201ENST00000363286 116 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 SNORD116-12-201ENST00000384468 92 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 RNU6-1005P-201ENST00000384519 107 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SMAD6O43541 RNU6-192P-201ENST00000391253 100 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 AL034403.1-201ENST00000399414 885 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 AL121978.1-201ENST00000402778 359 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 AL080315.1-201ENST00000406055 466 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 RNU4-72P-201ENST00000410754 173 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.69□□□□□ -1.66
SMAD6O43541 IPMKP1-201ENST00000425988 855 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.69□□□□□ -1.66
SMAD6O43541 AC068287.1-201ENST00000430283 295 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 AL353706.1-201ENST00000436728 494 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 CACYBPP1-201ENST00000438592 684 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 YWHAZP2-201ENST00000440317 728 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.69□□□□□ -1.66
SMAD6O43541 AL589880.1-201ENST00000448271 287 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 AC009220.1-201ENST00000451614 275 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.69□□□□□ -1.66
SMAD6O43541 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.69□□□□□ -1.66
SMAD6O43541 AC021205.1-201ENST00000468797 348 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 RPS3AP43-201ENST00000479743 781 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMAD6O43541 AC133963.2-201ENST00000513686 578 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 RNU6-1129P-201ENST00000515964 104 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 RNA5SP303-201ENST00000516192 130 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMAD6O43541 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.69□□□□□ -1.66
SMAD6O43541 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.69□□□□□ -1.66
SMAD6O43541 AP003461.1-201ENST00000528866 78 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 HIGD1AP5-201ENST00000529959 259 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 AC105233.3-201ENST00000531125 744 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 GSTP1P1-201ENST00000548078 319 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 HNRNPCP4-201ENST00000571636 900 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 MIR4715-201ENST00000584117 79 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.69□□□□□ -1.66
SMAD6O43541 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.69□□□□□ -1.66
SMAD6O43541 AC093765.1-201ENST00000603758 881 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 AC004492.1-201ENST00000607036 742 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 TUSC7.1-201ENST00000610969 165 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SMAD6O43541 MIR7641-1-201ENST00000627518 61 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.69□□□□□ -1.66
SMAD6O43541 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SMAD6O43541 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SMAD6O43541 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
SMAD6O43541 CYP1D1P-201ENST00000416662 1433 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 AC135352.1-201ENST00000506173 1418 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.69□□□□□ -1.66
SMAD6O43541 SGO1P1-201ENST00000603525 1447 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMAD6O43541 AC108467.2-201ENST00000617640 1597 ntBASIC4.69□□□□□ -1.66
SMAD6O43541 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.69□□□□□ -1.66
SMAD6O43541 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SMAD6O43541 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.69□□□□□ -1.66
SMAD6O43541 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.69□□□□□ -1.66
SMAD6O43541 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SMAD6O43541 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMAD6O43541 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SMAD6O43541 AL391684.1-202ENST00000641293 1636 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMAD6O43541 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.68□□□□□ -1.66
SMAD6O43541 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMAD6O43541 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMAD6O43541 AL049555.1-201ENST00000562834 1933 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.68□□□□□ -1.66
SMAD6O43541 OR51H2P-202ENST00000641424 3046 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMAD6O43541 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMAD6O43541 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMAD6O43541 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SMAD6O43541 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.68□□□□□ -1.66
SMAD6O43541 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SMAD6O43541 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.68□□□□□ -1.66
SMAD6O43541 RAP1BP1-201ENST00000412709 553 ntBASIC4.68□□□□□ -1.66
SMAD6O43541 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms