Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.15□□□□□ -1.91
SDCBPO00560 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.15□□□□□ -1.91
SDCBPO00560 FAM106CP-201ENST00000582212 507 ntBASIC3.15□□□□□ -1.91
SDCBPO00560 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.15□□□□□ -1.91
SDCBPO00560 VN1R81P-201ENST00000602085 372 ntBASIC3.15□□□□□ -1.91
SDCBPO00560 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.15□□□□□ -1.91
SDCBPO00560 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.15□□□□□ -1.91
SDCBPO00560 AL356274.1-201ENST00000617064 410 ntBASIC3.15□□□□□ -1.91
SDCBPO00560 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SDCBPO00560 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.15□□□□□ -1.91
SDCBPO00560 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SDCBPO00560 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.15□□□□□ -1.91
SDCBPO00560 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SDCBPO00560 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SDCBPO00560 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SDCBPO00560 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SDCBPO00560 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
SDCBPO00560 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SDCBPO00560 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SDCBPO00560 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SDCBPO00560 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SDCBPO00560 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SDCBPO00560 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SDCBPO00560 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SDCBPO00560 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SDCBPO00560 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
SDCBPO00560 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SDCBPO00560 SNORA11B-201ENST00000408175 129 ntBASIC3.14□□□□□ -1.91
SDCBPO00560 SMC4P1-201ENST00000414479 527 ntBASIC3.14□□□□□ -1.91
SDCBPO00560 SEC63P1-201ENST00000425785 1258 ntBASIC3.14□□□□□ -1.91
SDCBPO00560 RPS27AP12-201ENST00000429552 465 ntBASIC3.14□□□□□ -1.91
SDCBPO00560 RPS20P1-201ENST00000434853 354 ntBASIC3.14□□□□□ -1.91
SDCBPO00560 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.14□□□□□ -1.91
SDCBPO00560 AC114982.2-201ENST00000461396 358 ntBASIC3.14□□□□□ -1.91
SDCBPO00560 AC111000.5-201ENST00000506559 1178 ntBASIC3.14□□□□□ -1.91
SDCBPO00560 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.14□□□□□ -1.91
SDCBPO00560 FTH1P21-201ENST00000512179 511 ntBASIC3.14□□□□□ -1.91
SDCBPO00560 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.14□□□□□ -1.91
SDCBPO00560 HIGD1AP5-201ENST00000529959 259 ntBASIC3.14□□□□□ -1.91
SDCBPO00560 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.14□□□□□ -1.91
SDCBPO00560 AC091515.1-201ENST00000548110 679 ntBASIC3.14□□□□□ -1.91
SDCBPO00560 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.14□□□□□ -1.91
SDCBPO00560 PARP1P2-201ENST00000556806 195 ntBASIC3.14□□□□□ -1.91
SDCBPO00560 AC018552.3-201ENST00000567416 561 ntBASIC3.14□□□□□ -1.91
SDCBPO00560 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.14□□□□□ -1.91
SDCBPO00560 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.14□□□□□ -1.91
SDCBPO00560 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.14□□□□□ -1.91
SDCBPO00560 AL590392.1-201ENST00000604960 446 ntBASIC3.14□□□□□ -1.91
SDCBPO00560 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.14□□□□□ -1.91
SDCBPO00560 RNVU1-4-201ENST00000612985 164 ntBASIC3.14□□□□□ -1.91
SDCBPO00560 AC083809.1-201ENST00000615051 472 ntBASIC3.14□□□□□ -1.91
SDCBPO00560 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SDCBPO00560 AP006248.2-201ENST00000623309 592 ntBASIC3.14□□□□□ -1.91
SDCBPO00560 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.14□□□□□ -1.91
SDCBPO00560 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.14□□□□□ -1.91
SDCBPO00560 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.14□□□□□ -1.91
SDCBPO00560 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SDCBPO00560 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
SDCBPO00560 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
SDCBPO00560 AL021368.2-201ENST00000606125 5352 ntBASIC3.14□□□□□ -1.91
SDCBPO00560 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SDCBPO00560 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SDCBPO00560 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SDCBPO00560 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SDCBPO00560 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SDCBPO00560 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SDCBPO00560 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SDCBPO00560 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.13□□□□□ -1.91
SDCBPO00560 MIR372-201ENST00000362225 67 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.13□□□□□ -1.91
SDCBPO00560 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.13□□□□□ -1.91
SDCBPO00560 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SDCBPO00560 HMGB3P20-201ENST00000417997 600 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 TCEA1P2-201ENST00000420496 906 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 OR8F1P-201ENST00000425243 930 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 AL158073.1-201ENST00000426848 1104 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SDCBPO00560 AL353597.2-202ENST00000434901 373 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SDCBPO00560 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.13□□□□□ -1.91
SDCBPO00560 RPL21P89-201ENST00000444021 467 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 HSFY6P-201ENST00000445573 403 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.13□□□□□ -1.91
SDCBPO00560 EIF4A1P11-201ENST00000451239 222 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 OR9M1P-201ENST00000459641 921 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 NPM1P17-201ENST00000479221 602 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 TPT1P3-201ENST00000492841 512 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 NIPA2P2-201ENST00000496376 1083 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.13□□□□□ -1.91
SDCBPO00560 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.13□□□□□ -1.91
SDCBPO00560 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.13□□□□□ -1.91
SDCBPO00560 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.13□□□□□ -1.91
SDCBPO00560 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.13□□□□□ -1.91
SDCBPO00560 AL109741.3-201ENST00000561748 592 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 AGGF1P8-201ENST00000562979 1000 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.13□□□□□ -1.91
SDCBPO00560 AP005901.4-201ENST00000577336 569 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 AC016957.2-201ENST00000616998 848 ntBASIC3.13□□□□□ -1.91
SDCBPO00560 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.13□□□□□ -1.91
SDCBPO00560 AP003072.5-201ENST00000623872 773 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms