Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AC245028.1-201ENST00000423259 256 ntBASIC3.19□□□□□ -1.9
UPK2O00526 DNAJC19P7-201ENST00000428811 344 ntBASIC3.19□□□□□ -1.9
UPK2O00526 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.19□□□□□ -1.9
UPK2O00526 AL353093.1-201ENST00000441292 436 ntBASIC3.19□□□□□ -1.9
UPK2O00526 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.19□□□□□ -1.9
UPK2O00526 AL500522.2-201ENST00000448562 343 ntBASIC3.19□□□□□ -1.9
UPK2O00526 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.19□□□□□ -1.9
UPK2O00526 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.19□□□□□ -1.9
UPK2O00526 RN7SL738P-201ENST00000470264 297 ntBASIC3.19□□□□□ -1.9
UPK2O00526 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.19□□□□□ -1.9
UPK2O00526 SUMO1P1-201ENST00000497904 306 ntBASIC3.19□□□□□ -1.9
UPK2O00526 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.19□□□□□ -1.9
UPK2O00526 AC110792.2-201ENST00000510278 224 ntBASIC3.19□□□□□ -1.9
UPK2O00526 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK2O00526 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UPK2O00526 AC010285.3-201ENST00000511668 676 ntBASIC3.19□□□□□ -1.9
UPK2O00526 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.19□□□□□ -1.9
UPK2O00526 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UPK2O00526 IGHV3-32-201ENST00000519182 355 ntBASIC3.19□□□□□ -1.9
UPK2O00526 IGKV2-36-201ENST00000519999 223 ntBASIC3.19□□□□□ -1.9
UPK2O00526 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.19□□□□□ -1.9
UPK2O00526 PTP4A1P6-201ENST00000531034 478 ntBASIC3.19□□□□□ -1.9
UPK2O00526 CBX3P5-201ENST00000552017 521 ntBASIC3.19□□□□□ -1.9
UPK2O00526 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK2O00526 AL049870.4-201ENST00000555741 486 ntBASIC3.19□□□□□ -1.9
UPK2O00526 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.19□□□□□ -1.9
UPK2O00526 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK2O00526 MIR4277-201ENST00000578298 84 ntBASIC3.19□□□□□ -1.9
UPK2O00526 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.19□□□□□ -1.9
UPK2O00526 AC116651.1-201ENST00000609724 556 ntBASIC3.19□□□□□ -1.9
UPK2O00526 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UPK2O00526 AL139089.1-201ENST00000620372 975 ntBASIC3.19□□□□□ -1.9
UPK2O00526 AL359715.5-201ENST00000623431 443 ntBASIC3.19□□□□□ -1.9
UPK2O00526 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.19□□□□□ -1.9
UPK2O00526 AC005261.4-201ENST00000600047 1385 ntBASIC3.19□□□□□ -1.9
UPK2O00526 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.19□□□□□ -1.9
UPK2O00526 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UPK2O00526 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UPK2O00526 AL021368.2-201ENST00000606125 5352 ntBASIC3.19□□□□□ -1.9
UPK2O00526 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
UPK2O00526 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
UPK2O00526 DCAF13P1-201ENST00000495256 1330 ntBASIC3.19□□□□□ -1.9
UPK2O00526 DCAF13P3-201ENST00000561147 1334 ntBASIC3.19□□□□□ -1.9
UPK2O00526 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.19□□□□□ -1.9
UPK2O00526 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
UPK2O00526 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UPK2O00526 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.18□□□□□ -1.9
UPK2O00526 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UPK2O00526 RNA5SP322-201ENST00000363617 119 ntBASIC3.18□□□□□ -1.9
UPK2O00526 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UPK2O00526 CCNB2P1-201ENST00000399411 1150 ntBASIC3.18□□□□□ -1.9
UPK2O00526 RN7SKP33-201ENST00000410942 340 ntBASIC3.18□□□□□ -1.9
UPK2O00526 TPT1P2-201ENST00000413105 503 ntBASIC3.18□□□□□ -1.9
UPK2O00526 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK2O00526 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.18□□□□□ -1.9
UPK2O00526 RPL7P53-201ENST00000421245 739 ntBASIC3.18□□□□□ -1.9
UPK2O00526 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.18□□□□□ -1.9
UPK2O00526 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UPK2O00526 AC083863.1-201ENST00000438811 231 ntBASIC3.18□□□□□ -1.9
UPK2O00526 RPL34P26-201ENST00000445636 354 ntBASIC3.18□□□□□ -1.9
UPK2O00526 HMGB1P16-201ENST00000447155 540 ntBASIC3.18□□□□□ -1.9
UPK2O00526 EIF2S2P2-201ENST00000447161 982 ntBASIC3.18□□□□□ -1.9
UPK2O00526 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK2O00526 CYCSP42-201ENST00000450823 238 ntBASIC3.18□□□□□ -1.9
UPK2O00526 AL133477.1-201ENST00000457472 514 ntBASIC3.18□□□□□ -1.9
UPK2O00526 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK2O00526 AC105137.1-201ENST00000484355 562 ntBASIC3.18□□□□□ -1.9
UPK2O00526 AP002812.4-201ENST00000532139 286 ntBASIC3.18□□□□□ -1.9
UPK2O00526 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.18□□□□□ -1.9
UPK2O00526 AC091516.1-201ENST00000549191 703 ntBASIC3.18□□□□□ -1.9
UPK2O00526 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK2O00526 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.18□□□□□ -1.9
UPK2O00526 AC007424.1-203ENST00000554613 687 ntBASIC3.18□□□□□ -1.9
UPK2O00526 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK2O00526 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.18□□□□□ -1.9
UPK2O00526 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.18□□□□□ -1.9
UPK2O00526 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK2O00526 AC020914.4-201ENST00000597690 277 ntBASIC3.18□□□□□ -1.9
UPK2O00526 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.18□□□□□ -1.9
UPK2O00526 AC084036.1-201ENST00000609190 508 ntBASIC3.18□□□□□ -1.9
UPK2O00526 MIR6868-201ENST00000611215 58 ntBASIC3.18□□□□□ -1.9
UPK2O00526 AC073342.3-201ENST00000624211 193 ntBASIC3.18□□□□□ -1.9
UPK2O00526 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UPK2O00526 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UPK2O00526 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
UPK2O00526 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.18□□□□□ -1.9
UPK2O00526 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UPK2O00526 PNPT1P2-201ENST00000456768 2050 ntBASIC3.18□□□□□ -1.9
UPK2O00526 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UPK2O00526 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
UPK2O00526 SAGE2P-201ENST00000420011 2126 ntBASIC3.17□□□□□ -1.9
UPK2O00526 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
UPK2O00526 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPK2O00526 AL133412.1-201ENST00000380194 2992 ntBASIC3.17□□□□□ -1.9
UPK2O00526 AC007342.9-201ENST00000623877 1385 ntBASIC3.17□□□□□ -1.9
UPK2O00526 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
UPK2O00526 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
UPK2O00526 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.17□□□□□ -1.9
UPK2O00526 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.17□□□□□ -1.9
UPK2O00526 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms