Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RFXAPO00287 AC007342.7-201ENST00000624610 2337 ntBASIC5.71□□□□□ -1.49
RFXAPO00287 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
RFXAPO00287 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.71□□□□□ -1.5
RFXAPO00287 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.71□□□□□ -1.5
RFXAPO00287 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFXAPO00287 AP002512.4-202ENST00000641599 4530 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFXAPO00287 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFXAPO00287 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RFXAPO00287 RNU6-534P-201ENST00000364877 106 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 Y_RNA.302-201ENST00000364997 102 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFXAPO00287 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFXAPO00287 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFXAPO00287 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RFXAPO00287 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RFXAPO00287 RNA5SP91-201ENST00000390902 119 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 MTCYBP36-201ENST00000404146 440 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 RN7SKP56-201ENST00000410513 331 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.71□□□□□ -1.5
RFXAPO00287 RPL23AP39-201ENST00000415533 405 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 CHEK2P3-201ENST00000416118 248 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 AC009237.2-201ENST00000421358 284 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RFXAPO00287 MTCYBP45-201ENST00000435243 565 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 AC104850.1-201ENST00000435940 476 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.71□□□□□ -1.5
RFXAPO00287 AC244505.5-201ENST00000443639 207 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.71□□□□□ -1.5
RFXAPO00287 AC104634.1-201ENST00000452720 462 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.71□□□□□ -1.5
RFXAPO00287 PTGES3P3-201ENST00000511479 482 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 RN7SKP141-201ENST00000516167 338 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 OR5AQ1P-201ENST00000527596 927 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 AC125611.2-201ENST00000551907 647 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.71□□□□□ -1.5
RFXAPO00287 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.71□□□□□ -1.5
RFXAPO00287 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.71□□□□□ -1.5
RFXAPO00287 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC5.71□□□□□ -1.5
RFXAPO00287 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.71□□□□□ -1.5
RFXAPO00287 MIR4691-201ENST00000583764 85 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 BNIP3P11-201ENST00000603878 563 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 AC009220.3-201ENST00000604318 586 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFXAPO00287 AC009597.2-201ENST00000604659 592 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 AL360085.1-201ENST00000604713 532 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 AP005137.2-201ENST00000609238 400 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFXAPO00287 AL445264.1-201ENST00000621719 171 ntBASIC5.71□□□□□ -1.5
RFXAPO00287 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.71□□□□□ -1.5
RFXAPO00287 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RFXAPO00287 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RFXAPO00287 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.71□□□□□ -1.5
RFXAPO00287 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.71□□□□□ -1.5
RFXAPO00287 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RFXAPO00287 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RFXAPO00287 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.71□□□□□ -1.5
RFXAPO00287 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
RFXAPO00287 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
RFXAPO00287 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFXAPO00287 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.7□□□□□ -1.5
RFXAPO00287 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFXAPO00287 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RFXAPO00287 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFXAPO00287 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFXAPO00287 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.7□□□□□ -1.5
RFXAPO00287 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFXAPO00287 HSPD1P7-201ENST00000447985 1686 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFXAPO00287 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RFXAPO00287 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.7□□□□□ -1.5
RFXAPO00287 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFXAPO00287 FRG1BP-201ENST00000278882 761 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 FRG1CP-201ENST00000358464 769 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 RNY4P14-201ENST00000363656 96 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 RNU6-1227P-201ENST00000383981 107 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFXAPO00287 AL078599.1-201ENST00000402075 293 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 RNU6-248P-201ENST00000410720 107 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 RNU6-575P-201ENST00000411326 105 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 NPM1P40-201ENST00000412758 733 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.7□□□□□ -1.5
RFXAPO00287 AC069157.1-201ENST00000421749 137 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 AL512649.1-201ENST00000428997 581 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.7□□□□□ -1.5
RFXAPO00287 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.7□□□□□ -1.5
RFXAPO00287 AC234064.1-201ENST00000436312 247 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 RPS4XP4-201ENST00000443195 763 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC5.7□□□□□ -1.5
RFXAPO00287 GAPDHP25-201ENST00000447061 1001 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 AC005002.1-201ENST00000447458 540 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.7□□□□□ -1.5
RFXAPO00287 AL672138.1-201ENST00000450604 1015 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 AL356981.1-201ENST00000454879 684 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC5.7□□□□□ -1.5
RFXAPO00287 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.7□□□□□ -1.5
RFXAPO00287 ARPC3P2-201ENST00000457786 533 ntBASIC5.7□□□□□ -1.5
RFXAPO00287 OR52A4P-201ENST00000472867 958 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms