Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HMGB2P1-201ENST00000591146 634 ntBASIC4.11□□□□□ -1.75
NPIPA3F8WFD2 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.11□□□□□ -1.75
NPIPA3F8WFD2 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.11□□□□□ -1.75
NPIPA3F8WFD2 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NPIPA3F8WFD2 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NPIPA3F8WFD2 AP002802.2-201ENST00000605877 235 ntBASIC4.11□□□□□ -1.75
NPIPA3F8WFD2 AC008966.2-201ENST00000606157 453 ntBASIC4.11□□□□□ -1.75
NPIPA3F8WFD2 AC090948.1-201ENST00000607464 549 ntBASIC4.11□□□□□ -1.75
NPIPA3F8WFD2 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.11□□□□□ -1.75
NPIPA3F8WFD2 AC139713.2-210ENST00000641741 992 ntBASIC4.11□□□□□ -1.75
NPIPA3F8WFD2 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.11□□□□□ -1.75
NPIPA3F8WFD2 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
NPIPA3F8WFD2 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.11□□□□□ -1.75
NPIPA3F8WFD2 AC135352.1-201ENST00000506173 1418 ntBASIC4.11□□□□□ -1.75
NPIPA3F8WFD2 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPIPA3F8WFD2 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPIPA3F8WFD2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 RNA5SP391-201ENST00000363456 119 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 RNU6-353P-201ENST00000364266 108 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 MCTS2P-201ENST00000394552 546 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 HNRNPDP2-201ENST00000406475 478 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 MIR1271-201ENST00000408537 86 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 PRELID3BP11-201ENST00000414230 479 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 MTND2P15-201ENST00000418575 892 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 RPL21P43-201ENST00000425440 472 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 CEACAMP1-201ENST00000434624 1035 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 AC002542.1-201ENST00000440683 193 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 AC004865.1-201ENST00000442276 1003 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 ISCUP1-201ENST00000454451 448 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 RPL7P32-201ENST00000457119 744 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 AC010618.1-201ENST00000469924 477 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 RPS4XP18-201ENST00000495480 763 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 RNA5SP464-201ENST00000516251 108 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 AC138701.1-201ENST00000524329 714 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 AC124293.1-201ENST00000530034 493 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 YWHAZP1-201ENST00000556286 722 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 MIR3939-201ENST00000582614 106 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 MIR4512-201ENST00000583257 77 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 VN1R88P-201ENST00000596787 292 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 BNIP3P39-201ENST00000601077 554 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 RNF138P2-201ENST00000603490 592 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 AC009948.4-201ENST00000604692 675 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 AC144521.1-201ENST00000607148 956 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 AC099654.8-201ENST00000637757 681 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 AC022893.2-201ENST00000564832 3296 ntBASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.1□□□□□ -1.75
NPIPA3F8WFD2 AC126323.6-202ENST00000568092 3511 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 SDHCP2-201ENST00000398565 501 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 FCF1P5-201ENST00000406490 482 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 RPL23AP25-201ENST00000430973 463 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 RPL21P110-201ENST00000433345 446 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 RPL5P30-201ENST00000465511 891 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 208.3 ms