Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 CYCSP2-201ENST00000558168 301 ntBASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 PCMTD1P2-201ENST00000565017 355 ntBASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 MTCYBP28-201ENST00000566728 1132 ntBASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 MIR4504-201ENST00000577413 92 ntBASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 MIR4637-201ENST00000582405 84 ntBASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 AC011477.5-201ENST00000586571 259 ntBASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 AL159169.3-201ENST00000608871 561 ntBASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 SAMMSON-213ENST00000641336 1521 ntBASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHGA6Q9Y5G7 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 ABCC13-202ENST00000463099 3842 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 ERCC6-202ENST00000374127 1782 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 RNA5SP326-201ENST00000363209 110 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 RNA5SP335-201ENST00000363817 110 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 SNORD116-4-201ENST00000384733 96 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 RNU1-77P-201ENST00000390868 162 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 SNRPEP2-201ENST00000397592 279 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AL133270.1-201ENST00000402635 279 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 ZNF603P-201ENST00000405613 487 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 TPMTP3-201ENST00000411928 735 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 RNF10P1-201ENST00000418589 369 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AL358176.3-201ENST00000420757 454 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 COX6CP15-201ENST00000426313 211 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AL117351.1-201ENST00000438864 766 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 NDUFA12P1-201ENST00000455914 406 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 RN7SL222P-201ENST00000476452 299 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 FAM172BP-201ENST00000487497 1089 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 RPS23P1-201ENST00000491662 432 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 RPL15P21-201ENST00000495592 567 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC008953.1-201ENST00000497334 318 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC006499.5-201ENST00000505037 514 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC104057.1-201ENST00000515547 497 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 RN7SKP82-201ENST00000516786 223 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 RN7SKP99-201ENST00000517028 307 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 IGLV3-24-201ENST00000517477 197 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AP006245.2-201ENST00000522004 300 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC022832.1-201ENST00000530718 645 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC008127.2-201ENST00000549925 1075 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AL359219.2-201ENST00000555184 348 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 HSPE1P3-201ENST00000559254 309 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC136618.2-201ENST00000575091 400 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC008507.1-201ENST00000587506 734 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 BNIP3P11-201ENST00000603878 563 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AC015908.5-201ENST00000623289 343 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 AL359715.5-201ENST00000623431 443 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 OR4F13P-202ENST00000560066 2054 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 OR4G11P-202ENST00000642116 1414 ntBASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCDHGA6Q9Y5G7 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC5.21□□□□□ -1.57
PCDHGA6Q9Y5G7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.57
PCDHGA6Q9Y5G7 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.21□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms