Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 RNA5SP319-201ENST00000362768 119 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 RNU6-433P-201ENST00000363216 104 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 RNU5F-7P-201ENST00000363696 115 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 RNA5SP234-201ENST00000363916 119 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 RNU6-115P-201ENST00000364310 107 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 RNA5SP132-201ENST00000364725 118 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 Y_RNA.582-201ENST00000391023 95 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AC007066.1-201ENST00000392902 381 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AC092634.6-201ENST00000418558 192 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AC073335.1-201ENST00000427776 363 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 MTCO3P21-201ENST00000430791 643 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 UBE2V1P8-201ENST00000437166 265 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 HMGN2P25-201ENST00000486956 268 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AC090638.1-201ENST00000498296 909 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AC106872.4-201ENST00000510050 523 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AC108471.1-201ENST00000513977 287 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 NPM1P6-201ENST00000521088 871 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 MED28P5-201ENST00000528254 438 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 CR383656.6-201ENST00000550518 394 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 MIR4528-201ENST00000577763 90 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AL139124.1-201ENST00000609123 421 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AC116651.1-201ENST00000609724 556 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 ZNF37BP-203ENST00000452306 1352 ntBASIC5.67□□□□□ -1.5
PPARGC1AQ9UBK2 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AC025125.1-201ENST00000624743 1922 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AC092681.1-201ENST00000297369 291 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 Y_RNA.88-201ENST00000363029 99 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 RNU6-723P-201ENST00000383973 107 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 RNU2-50P-201ENST00000410494 143 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AC009302.1-201ENST00000417147 390 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AL513325.1-201ENST00000417716 1034 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AL953862.1-201ENST00000423016 168 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AC005033.1-201ENST00000428904 813 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AL139415.2-201ENST00000431968 163 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AL031663.1-201ENST00000437445 219 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AL831737.1-201ENST00000441288 271 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AC239367.2-201ENST00000447309 705 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 SNORD42A-201ENST00000459584 64 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 MTCO3P38-201ENST00000468910 766 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 OR4G11P-201ENST00000492842 939 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AC116353.2-201ENST00000505332 712 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 MTCYBP43-201ENST00000513621 740 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 RNU6-506P-201ENST00000516553 94 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 SNORA48.10-201ENST00000516965 160 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AC025881.1-201ENST00000518851 512 ntBASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.66□□□□□ -1.5
PPARGC1AQ9UBK2 AP002453.2-201ENST00000533503 320 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms